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BioLiP
>protein
AASWSHPQFEKGAETAVPNSGGGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPGMPAFGEA
MIPPADALKIGEYVVASFP

The query sequence (length=99) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3dp5:A 99 99 1.0000 1.0000 1.0000 3.37e-70 3cu4:A, 5mcs:A, 6u97:A
2 7y5e:GN 84 75 0.2727 0.3214 0.3600 8.04e-13 7y5e:G2, 7y7a:G7, 7y7a:Go
3 1gdv:A 85 77 0.2525 0.2941 0.3247 1.27e-11
4 4gyd:A 86 74 0.2424 0.2791 0.3243 1.48e-09 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
5 4eie:A 82 74 0.2323 0.2805 0.3108 2.43e-09 4eif:A
6 3ph2:B 85 56 0.2121 0.2471 0.3750 2.80e-09 2v08:A, 2v08:B
7 2zbo:A 86 75 0.2222 0.2558 0.2933 8.52e-09 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
8 4kmg:A 88 64 0.2121 0.2386 0.3281 4.48e-08
9 3dmi:A 87 78 0.2525 0.2874 0.3205 2.39e-07
10 2dge:A 102 62 0.2323 0.2255 0.3710 3.20e-07 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
11 1cyj:A 90 75 0.2525 0.2778 0.3333 9.51e-07 1cyi:A
12 1c6s:A 87 56 0.1919 0.2184 0.3393 4.55e-06 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
13 3dr0:A 93 73 0.2626 0.2796 0.3562 4.11e-05 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
14 1ls9:A 91 75 0.2222 0.2418 0.2933 7.58e-05
15 1a2s:A 89 58 0.2121 0.2360 0.3621 8.48e-05 1ced:A, 1ctj:A
16 1c6o:A 89 58 0.1919 0.2135 0.3276 6.40e-04 1c6o:B, 1c6r:A
17 1kib:A 89 79 0.2323 0.2584 0.2911 0.001 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
18 5lo9:A 471 98 0.2626 0.0552 0.2653 0.13 5lo9:B
19 4yuu:V1 129 54 0.1616 0.1240 0.2963 0.41 4yuu:v1, 4yuu:V2, 4yuu:v2
20 7o38:A 81 62 0.1919 0.2346 0.3065 0.96
21 8k9e:A 218 92 0.2323 0.1055 0.2500 1.2 8k9f:A, 8x2j:A
22 6f0k:E 182 88 0.2929 0.1593 0.3295 1.2
23 1fcd:C 174 20 0.1010 0.0575 0.5000 1.3 1fcd:D
24 7o9u:A 153 92 0.2626 0.1699 0.2826 1.7
25 4lji:A 133 60 0.1818 0.1353 0.3000 1.7 4lji:B
26 7td5:B 373 9 0.0909 0.0241 1.0000 1.7 6c23:L, 6c24:L, 5gsa:A, 5gsa:B, 5h13:A, 5h14:B, 5h14:A, 5h15:A, 5h15:B, 5h17:A, 5h19:A, 5h24:A, 5h24:B, 5h25:A, 5h25:B, 5hyn:B, 5hyn:G, 5hyn:L, 5hyn:R, 3iiw:A, 3iiy:A, 3ij0:A, 3ij1:A, 3ijc:A, 5ij7:E, 5ij7:F, 5ij8:F, 5ij8:E, 3jpx:A, 3jzg:A, 3jzh:A, 5k0m:A, 3k26:A, 3k27:A, 7kxt:A, 7kxt:B, 6lo2:A, 6lo2:B, 5ls6:B, 5ls6:E, 5ls6:H, 5ls6:K, 7msb:A, 7msd:A, 7p3c:A, 7p3c:B, 7p3g:A, 7p3g:B, 7p3j:A, 7p3j:B, 7qjg:B, 7qjg:A, 7qju:A, 7qju:B, 7qk4:A, 2qxv:A, 6sfb:A, 6sfb:B, 6sfc:A, 6sfc:B, 7si4:A, 7si5:A, 8t9g:K, 7td5:G, 5ttw:A, 5ttw:C, 5u5h:A, 5u5k:A, 5u5t:A, 5u5t:B, 5u62:A, 5u62:B, 5u69:A, 5u6d:A, 5u8a:A, 5u8f:A, 6v3x:A, 6v3y:A, 6w7f:A, 6w7g:A, 5wuk:A, 4x3e:A, 6yvi:A, 6yvi:B, 6yvj:A, 6yvj:B
27 3vrd:A 174 20 0.1010 0.0575 0.5000 1.8
28 7akt:A 107 9 0.0909 0.0841 1.0000 2.0 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
29 8h3x:C 357 62 0.1717 0.0476 0.2742 2.2 8h3y:A, 8h3y:B, 8h3y:C, 3p24:A, 3p24:B, 3p24:C, 3p24:D, 7pnd:A, 7pnd:B, 7pol:A, 7poo:A, 7poo:B, 7poq:A, 7poq:B, 7pou:A, 7pou:B, 8wem:C, 8wem:A, 8weo:B, 8weo:A
30 6btm:E 161 22 0.1212 0.0745 0.5455 2.9
31 6toe:B 293 36 0.1515 0.0512 0.4167 3.0 6to4:A, 6to4:D, 6to4:B, 6to4:C, 6toe:A, 6toe:F, 6toe:C
32 5d88:A 247 10 0.0909 0.0364 0.9000 3.1
33 8wql:VD 135 54 0.1717 0.1259 0.3148 3.2 1f1c:A, 1f1c:B, 8wql:VE, 8wql:V1, 8wql:v1, 8wql:vD, 8wql:vE
34 5djq:C 303 79 0.1919 0.0627 0.2405 3.5 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
35 2yev:B 319 99 0.2828 0.0878 0.2828 3.6 2yev:E
36 3ihj:A 461 39 0.1717 0.0369 0.4359 3.8
37 2xkk:C 711 28 0.1212 0.0169 0.4286 3.9 2xkk:A
38 3a0b:V 137 54 0.1818 0.1314 0.3333 3.9 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v
39 5huq:A 433 9 0.0909 0.0208 1.0000 4.1 6c1w:A, 6c1w:B, 6c1w:C, 8ezf:B, 8ezh:B, 8ezi:B, 5huq:B
40 8p66:B 54 8 0.0808 0.1481 1.0000 5.7
41 7o1o:A 356 10 0.0808 0.0225 0.8000 7.2 3ciw:A, 3cix:A, 5fep:A, 5fes:A, 5few:A, 5fex:A, 5fez:A, 5ff0:A, 5ff2:A, 5ff3:A, 5ff4:A, 3iix:A, 3iiz:A, 4jxc:A, 4jy8:A, 4jy9:A, 4jyd:A, 4jye:A, 4jyf:A, 7o1p:A, 7o1s:A, 7o1t:A, 7o25:A, 7o26:A, 8qmk:A, 8qml:A, 8qmm:A, 8qmn:A
42 8smr:G 312 61 0.1818 0.0577 0.2951 7.7
43 2c8s:A 149 13 0.0909 0.0604 0.6923 7.8
44 7pol:B 336 35 0.1010 0.0298 0.2857 8.2 8wen:C, 8wen:A
45 3per:A 477 9 0.0808 0.0168 0.8889 8.2 3per:B, 3pf7:A, 3pf7:B, 3pm5:A, 3pm5:B, 3pm5:C, 3pm5:D, 3q1g:A, 3q1g:B, 3q1g:C, 3q1g:D
46 7qhm:C 233 24 0.1010 0.0429 0.4167 8.2 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
47 7ajq:D 236 22 0.1212 0.0508 0.5455 8.4 7ajq:A, 7ajq:E, 7ajq:B, 7ajq:C
48 6hl7:C 322 10 0.0707 0.0217 0.7000 8.5
49 6h3u:A 246 8 0.0808 0.0325 1.0000 8.7 6h3t:A, 6h3t:B, 6h3u:B
50 2xts:D 204 45 0.1313 0.0637 0.2889 9.0 2xts:B
51 3ua3:A 662 21 0.1010 0.0151 0.4762 9.0 3ua3:B
52 4o1w:A 79 75 0.1919 0.2405 0.2533 9.5 4o1w:D, 4o1w:B, 4o1w:C, 4o1w:E, 4o1w:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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