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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AASSRAQVLALYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLGVIRRQVHIGQLYSTDKL
IIENR

The query sequence (length=85) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6uxe:B 85 85 1.0000 1.0000 1.0000 2.14e-57 6nzu:B, 6nzu:F, 6odd:B, 8pk8:B, 8pk9:B, 8pka:B, 7rtk:B, 8tvt:B, 5usr:F, 5usr:H, 5usr:B, 5usr:D, 6w1d:B, 5wgb:B, 6wi2:B, 6wih:B, 5wkp:B, 5wkp:F, 5wlw:B, 5wlw:F
2 7a5h:v 69 47 0.2235 0.2754 0.4043 0.002 8k2b:v, 7o9k:v, 7o9m:v, 7odr:v, 7ods:v, 7odt:v, 7oi6:v, 7oi7:v, 7oi8:v, 7oi9:v, 7oic:v, 7oid:v, 7oie:v, 5ool:v, 5oom:v, 7pd3:v, 8pk0:v, 7po4:zb, 8qsj:v, 8qu5:v
3 8e73:B9 111 59 0.2235 0.1712 0.3220 0.005
4 6nsh:Y2 72 33 0.1765 0.2083 0.4545 0.008 5a9z:AY, 5aa0:AY, 7azo:L29A, 7azo:L29B, 7azs:L29A, 7azs:L29B, 9b00:12, 9b00:22, 6b4v:Z, 6b4v:DC, 6boh:Z, 6boh:EC, 6bok:Z, 6bok:CC, 6buw:R2, 6buw:Y2, 6bz6:R2, 6bz6:Y2, 6bz7:R2, 6bz7:Y2, 6bz8:R2, 6bz8:Y2, 6c5l:B2, 6c5l:D2, 6cae:12, 6cae:22, 6cfj:12, 6cfj:22, 6cfk:12, 6cfk:22, 6cfl:12, 6cfl:22, 8cvj:12, 8cvj:22, 8cvk:12, 8cvk:22, 8cvl:12, 8cvl:22, 5czp:Y2, 5czp:R2, 6czr:12, 6czr:22, 5d8b:W, 5d8b:SB, 5dfe:Y2, 5dfe:R2, 5dox:12, 5dox:22, 5doy:12, 5doy:22, 5e7k:K8, 5e7k:G5, 5e81:K8, 5e81:G5, 8ekb:12, 8ekb:22, 5el4:K8, 5el4:G5, 5el5:K8, 5el5:G5, 5el6:K8, 5el6:G5, 5el7:K8, 5el7:G5, 8ev6:12, 8ev6:22, 8ev7:12, 8ev7:22, 5f8k:12, 5f8k:22, 8fc1:12, 8fc1:22, 8fc2:12, 8fc2:22, 8fc3:12, 8fc3:22, 8fc4:12, 8fc4:22, 8fc5:12, 8fc5:22, 8fc6:12, 8fc6:22, 5fdu:12, 5fdu:22, 5fdv:12, 5fdv:22, 6fkr:12, 6fkr:22, 8fom:R2, 8fom:Y2, 8fon:R2, 8fon:Y2, 8g29:12, 8g29:22, 8g2a:12, 8g2a:22, 8g2b:12, 8g2b:22, 8g2c:12, 8g2c:22, 8g2d:12, 8g2d:22, 6gsj:K8, 6gsj:G5, 6gsk:K8, 6gsk:G5, 6gsl:K8, 6gsl:G5, 6gzq:X1, 6gzx:X1, 6gzx:X2, 6gzz:X1, 6gzz:X2, 5hau:10, 5hau:20, 5hcp:12, 5hcp:22, 5hcq:12, 5hcq:22, 5hcr:12, 5hcr:22, 5hd1:12, 5hd1:22, 5ib7:K8, 5ib7:G5, 5ib8:K8, 5ib8:G5, 5ibb:K8, 5ibb:G5, 5imq:t, 5imr:t, 5j30:R2, 5j30:Y2, 5j3c:R2, 5j3c:Y2, 5j4b:12, 5j4b:22, 5j4c:12, 5j4c:22, 5j4d:Z, 5j4d:EC, 5j8b:2, 7jql:12, 7jql:22, 7jqm:12, 7jqm:22, 4l47:R2, 4l47:Y2, 4l71:R2, 4l71:Y2, 4lel:R2, 4lel:Y2, 4lfz:R2, 4lfz:Y2, 7lh5:B2, 7lh5:D2, 4lnt:R2, 4lnt:Y2, 4lsk:R2, 4lsk:Y2, 4lt8:R2, 4lt8:Y2, 7md7:12, 7md7:22, 6n1d:AL29, 6n1d:BL29, 6n9e:12, 6n9e:22, 6n9f:12, 6n9f:22, 5ndj:K8, 5ndj:G5, 5ndk:K8, 5ndk:G5, 6nd5:12, 6nd5:22, 6nd6:12, 6nd6:22, 6ndk:R2, 6ndk:Y2, 6nsh:R2, 6nta:R2, 6nta:Y2, 6nuo:R2, 6nuo:Y2, 6nwy:R2, 6nwy:Y2, 6o3m:R2, 6o3m:Y2, 6o97:12, 6o97:22, 6of1:12, 6of1:22, 6of6:R2, 6of6:Y2, 6oj2:R2, 6oj2:Y2, 6ope:R2, 6ope:Y2, 6ord:R2, 6ord:Y2, 6osi:R2, 6osi:Y2, 5ot7:X, 6otr:R2, 6otr:Y2, 6oxa:R2, 6oxa:Y2, 6oxi:R2, 6oxi:Y2, 4p6f:R2, 4p6f:Y2, 4p70:R2, 4p70:Y2, 6q95:Y, 6qnq:K8, 6qnq:G5, 6qnr:K8, 6qnr:G5, 7rq8:12, 7rq8:22, 7rq9:12, 7rq9:22, 7rqa:12, 7rqa:22, 7rqb:12, 7rqb:22, 7rqc:12, 7rqc:22, 7rqd:12, 7rqd:22, 7rqe:12, 7rqe:22, 8t8b:12, 8t8b:22, 8t8c:12, 8t8c:22, 4tua:R2, 4tua:Y2, 4tub:R2, 4tub:Y2, 4tuc:R2, 4tuc:Y2, 4tud:R2, 4tud:Y2, 4tue:R2, 4tue:Y2, 7u2h:12, 7u2h:22, 7u2i:12, 7u2i:22, 7u2j:12, 7u2j:22, 6ucq:12, 6ucq:22, 8ud6:12, 8ud6:22, 8ud7:12, 8ud7:22, 8ud8:12, 8ud8:22, 6uo1:12, 6uo1:22, 5uq7:2, 5uq8:2, 8uvr:12, 8uvr:22, 8uvs:12, 8uvs:22, 4v4i:W, 4v4j:W, 4v4x:B1, 4v4y:B1, 4v4z:B1, 4v51:B2, 4v51:D2, 4v5a:B2, 4v5a:D2, 4v5c:B2, 4v5c:D2, 4v5d:B2, 4v5d:D2, 4v5e:B2, 4v5e:D2, 4v5f:B2, 4v5f:D2, 4v5g:B2, 4v5g:D2, 4v5j:B2, 4v5j:D2, 4v5k:B2, 4v5k:D2, 4v5l:B2, 4v5m:B2, 4v5n:B2, 4v5p:B2, 4v5p:D2, 4v5q:B2, 4v5q:D2, 4v5r:B2, 4v5r:D2, 4v5s:B2, 4v5s:D2, 4v63:B2, 4v63:D2, 4v67:B2, 4v67:D2, 4v68:B2, 4v6a:B2, 4v6a:D2, 4v6f:AW, 4v6f:DW, 4v6g:BW, 4v6g:DW, 4v7j:A2, 4v7j:B2, 4v7k:A2, 4v7k:B2, 4v7l:B2, 4v7l:D2, 4v7m:B2, 4v7m:D2, 4v7p:BY, 4v7p:CY, 4v7w:B2, 4v7w:D2, 4v7x:B2, 4v7x:D2, 4v7y:B2, 4v7y:D2, 4v7z:B2, 4v7z:D2, 4v83:BY, 4v83:DY, 4v84:BY, 4v84:DY, 4v87:AW, 4v87:DW, 4v8a:A2, 4v8a:B2, 4v8b:BW, 4v8b:DW, 4v8c:AW, 4v8c:BW, 4v8d:BW, 4v8d:DW, 4v8e:AW, 4v8e:CW, 4v8f:AW, 4v8f:DW, 4v8g:B2, 4v8g:D2, 4v8h:B2, 4v8h:D2, 4v8i:B2, 4v8i:D2, 4v8j:B2, 4v8j:D2, 4v8n:B2, 4v8n:D2, 4v8o:B2, 4v8q:A2, 4v8u:B2, 4v8u:D2, 4v8x:B2, 4v8x:D2, 5v8i:12, 5v8i:22, 4v90:B2, 4v95:B2, 4v95:D2, 4v97:B2, 4v97:D2, 4v9a:BW, 4v9a:DW, 4v9b:BW, 4v9b:DW, 4v9h:B2, 4v9i:B2, 4v9i:D2, 4v9j:B2, 4v9j:D2, 4v9k:B2, 4v9k:D2, 4v9l:B2, 4v9l:D2, 4v9m:B2, 4v9m:D2, 4v9n:B2, 4v9n:D2, 4v9q:AY, 4v9q:CY, 4v9r:B2, 4v9r:D2, 4v9s:B2, 4v9s:D2, 5vp2:12, 5vp2:22, 5vpo:R2, 5vpo:Y2, 5vpp:R2, 5vpp:Y2, 8vtu:12, 8vtu:22, 8vtv:12, 8vtv:22, 8vtw:12, 8vtw:22, 8vtx:12, 8vtx:22, 8vty:12, 8vty:22, 1vvj:R2, 1vvj:Y2, 1vy4:B2, 1vy4:D2, 1vy5:B2, 1vy5:D2, 1vy6:B2, 1vy6:D2, 1vy7:B2, 1vy7:D2, 4w29:B2, 4w29:D2, 4w2e:2, 4w2f:B2, 4w2f:D2, 4w2g:B2, 4w2g:D2, 4w2h:B2, 4w2h:D2, 4w2i:B2, 4w2i:D2, 4w4g:R2, 4w4g:Y2, 5w4k:12, 5w4k:22, 5wis:12, 5wis:22, 5wit:12, 5wit:22, 4wpo:A2, 4wpo:C2, 4wq1:K8, 4wq1:G5, 4wqf:A2, 4wqf:C2, 4wqr:K8, 4wqr:G5, 4wqu:A2, 4wqu:C2, 4wqy:A2, 4wqy:C2, 4wr6:K8, 4wr6:G5, 4wra:K8, 4wra:G5, 4wro:K8, 4wsd:K8, 4wsd:G5, 4wsm:K8, 4wsm:G5, 4wt1:K8, 4wt1:G5, 4wt8:CK, 4wt8:DK, 4wu1:K8, 4wu1:G5, 4wzd:K8, 4wzd:G5, 4wzo:K8, 4wzo:G5, 4xej:AL29, 4xej:BL29, 6xhv:12, 6xhv:22, 6xhw:12, 6xhw:22, 6xhx:12, 6xhx:22, 6xhy:12, 6xhy:22, 6xqd:12, 6xqd:22, 6xqe:12, 6xqe:22, 4y4o:12, 4y4o:22, 4y4p:12, 4y4p:22, 4ypb:R2, 4ypb:Y2, 4yzv:R2, 4yzv:Y2, 4z3s:12, 4z3s:22, 4z8c:12, 4z8c:22, 4zer:12, 4zer:22, 5zlu:u, 4zsn:R2, 4zsn:Y2
5 8q0f:W 116 81 0.2353 0.1724 0.2469 1.5 7ak5:W, 7ak6:W, 7b93:W, 8c2s:W, 8ca3:W, 8ca5:W, 6g2j:W, 6g72:W, 5gup:Q, 8iao:W, 8iap:W, 8ib4:W, 8ib5:W, 8ib9:W, 8iba:W, 8ibd:W, 8ibe:W, 8ic2:W, 8ic3:W, 5lnk:g, 8olt:W, 8om1:W, 7psa:W, 8pw5:W1, 8pw6:W1, 8pw7:W1, 8q0a:W, 8q0j:W, 8q0m:W, 8q0o:W, 8q0q:W, 8q1p:W, 8q1u:W, 8q1y:W, 8q25:W, 8q45:W, 8q46:W, 8q47:W, 8q48:W, 8q49:W, 8q4a:W, 6q9d:A6, 6qa9:A6, 6qbx:A6, 6qc2:A6, 6qc3:A6, 6qc4:A6, 6qc5:A6, 6qc6:A6, 6qc7:A6, 6qc8:A6, 6qc9:A6, 6qca:A6, 6qcf:A6, 7qsd:W, 7qsk:W, 7qsl:W, 7qsm:W, 7qsn:W, 7qso:W, 7r41:W, 7r42:W, 7r43:W, 7r44:W, 7r45:W, 7r46:W, 7r47:W, 7r48:W, 7r4c:W, 7r4d:W, 7r4f:W, 7r4g:W, 8rgp:W, 8rgq:W, 8rgr:W, 8rgt:W, 8ud1:1W, 8ueo:1W, 8uep:1W, 8ueq:1W, 8uer:1W, 8ues:1W, 8uet:1W, 8ueu:1W, 8uev:1W, 8uew:1W, 8uex:1W, 8uey:1W, 8uez:1W, 8ugh:1W, 8ugi:1W, 8ugj:1W, 8ugn:1W, 8ugn:5W, 8ugr:1W, 8ugr:5W, 7v2c:E, 7v2d:E, 7v2e:E, 7v2f:E, 7v2h:E, 7v2k:E, 7v2r:E, 7v30:E, 7v31:E, 7v32:E, 7v33:E, 7v3m:E, 7vb7:E, 7vbn:E, 7vbz:E, 7vwj:E, 7vxp:E, 7vxu:E, 7vy8:E, 7vya:E, 7vyf:E, 7vyh:E, 7vyn:E, 7vz1:E, 7vzv:E, 7vzw:E, 7w00:E, 7w0h:E, 7w0r:E, 7w0y:E, 7w1o:E, 7w1p:E, 7w1t:E, 7w1u:E, 7w1v:E, 7w1z:E, 7w20:E, 7w2k:E, 7w2l:E, 7w2r:E, 7w2u:E, 7w2y:E, 7w31:E, 7w32:E, 7w35:E, 7w4c:E, 7w4d:E, 7w4e:E, 7w4f:E, 7w4g:E, 7w4j:E, 7w4k:E, 7w4l:E, 7w4m:E, 7w4n:E, 7w4q:E, 5xtb:E, 5xtd:E, 5xth:E, 5xti:E, 5xti:BE, 7zd6:g, 7zdh:g, 7zdj:g, 7zdm:g, 7zdp:g, 7zeb:g, 6zk9:g, 6zkc:g, 6zkd:g, 6zke:g, 6zkf:g, 6zkg:g, 6zkh:g, 6zki:g, 6zkj:g, 6zkk:g, 6zkl:g, 6zkm:g, 6zkn:g, 6zko:g, 6zkp:g, 6zkq:g, 6zkr:g, 6zks:g, 6zkt:g, 6zku:g, 6zkv:g, 6zr2:W, 6ztq:W
6 7zm7:R 98 48 0.2000 0.1735 0.3542 2.3 7zm8:R, 7zmb:R, 7zme:R, 7zmg:R, 7zmh:R
7 6db6:H 226 48 0.1529 0.0575 0.2708 2.6
8 7p04:A 1353 87 0.3176 0.0200 0.3103 2.9 7p05:A
9 7p06:A 1350 87 0.3176 0.0200 0.3103 3.0
10 2io9:B 603 39 0.1176 0.0166 0.2564 5.3 3a2y:A, 2io7:A, 2io7:B, 2io8:A, 2io8:B, 2io9:A, 2ioa:A, 2ioa:B, 3o98:A, 3o98:B
11 7b93:n 178 63 0.2118 0.1011 0.2857 6.8 7ak5:n, 7ak6:n, 8c2s:n, 8ca3:n, 8ca5:n, 6g2j:n, 6g72:n, 8iao:n, 8iaq:n, 8ib4:n, 8ib6:n, 8ib9:n, 8ibb:n, 8ibd:n, 8ibf:n, 8ic2:n, 8ic4:n, 8olt:n, 8om1:n, 7psa:n, 8pw5:n1, 8pw6:n1, 8pw7:n1, 8rgp:n, 8rgq:n, 8rgr:n, 8rgt:n, 6zr2:n, 6ztq:n

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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