Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AARSIAATPPKLIVAISVDQFSADLFSEYRQYYTGGLKRLTSEGAVFPRGYQSHAATETCPGHSTILTGSRPSRTGIIAN
NWFDLDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPATRVVSVAGKDRAAIMMGGATADQVWWLG
GPQGYVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNRTVGTGRFARDAGDYKGFRISPEQDAMT
LAFAAAAIENMQLGKQAQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKDGIDYVVVLTADHGGHD
LPERHRMNAMPMEQRVDMALTPKALNATIAEKAGLPGKKVIWSDGPSGDIYYDKGLTAAQRARVETEALKYLRAHPQVQT
VFTKAEIAATPSPSGPPESWSLIQEARASFYPSRSGDLLLLLKPRVMSIPEQAVMGSVATHGSPWDTDRRVPILFWRKGM
QHFEQPLGVETVDILPSLAALIKLPVPKDQIDGRCLDLVAGKDDSCAGQL

The query sequence (length=530) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5xwk:A 530 530 1.0000 1.0000 1.0000 0.0 3q3q:A
2 5xwi:A 503 526 0.9472 0.9980 0.9544 0.0
3 5tj3:A 520 532 0.2943 0.3000 0.2932 9.68e-47 5too:A
4 4lqy:A 379 82 0.0509 0.0712 0.3293 0.001 4lr2:A
5 6c01:A 819 82 0.0434 0.0281 0.2805 0.022 6c01:B, 6c02:A, 6c02:B
6 7mw8:C 385 78 0.0472 0.0649 0.3205 0.041 2gsn:A, 2gsn:B, 2gso:A, 2gso:B, 2gsu:A, 2gsu:B, 7mw8:A, 7mw8:D, 7mw8:B, 7mw8:E, 7mw8:F, 7n1s:A, 7n1s:B, 2rh6:A, 2rh6:B
7 6f2t:B 722 87 0.0547 0.0402 0.3333 0.043 6f2t:A, 6f2v:A, 6f2v:B, 6f2y:A, 6f2y:B, 6f30:A, 6f30:B, 6f33:A, 6f33:B
8 6g4g:C 742 87 0.0547 0.0391 0.3333 0.046
9 6g4g:D 781 87 0.0547 0.0371 0.3333 0.047 6g4g:A
10 4gtw:A 706 74 0.0377 0.0283 0.2703 0.091 4gtw:B, 4gtx:A, 4gtx:B, 4gty:A, 4gty:B, 4gtz:A, 4gtz:B, 6xkd:B
11 4gtw:A 706 80 0.0453 0.0340 0.3000 0.16 4gtw:B, 4gtx:A, 4gtx:B, 4gty:A, 4gty:B, 4gtz:A, 4gtz:B, 6xkd:B
12 6xkd:A 679 74 0.0377 0.0295 0.2703 0.092
13 6xkd:A 679 80 0.0453 0.0353 0.3000 0.15
14 6wev:AbA 817 80 0.0472 0.0306 0.3125 0.13 8ghr:A, 8ghr:B, 6wet:AaA, 6wet:BaB, 6weu:AbA, 6weu:BbB, 6wev:BbB, 6wew:AbA, 6wew:BaB, 6wfj:AcA, 6wfj:BcB
15 6wev:AbA 817 74 0.0358 0.0233 0.2568 0.26 8ghr:A, 8ghr:B, 6wet:AaA, 6wet:BaB, 6weu:AbA, 6weu:BbB, 6wev:BbB, 6wew:AbA, 6wew:BaB, 6wfj:AcA, 6wfj:BcB
16 4b56:A 816 74 0.0377 0.0245 0.2703 0.15 6aek:A, 6ael:A, 4b56:B
17 4b56:A 816 80 0.0453 0.0294 0.3000 0.20 6aek:A, 6ael:A, 4b56:B
18 6g4g:B 759 65 0.0453 0.0316 0.3692 0.15
19 3crv:A 551 86 0.0396 0.0381 0.2442 0.18 5h8c:A
20 3crw:1 485 86 0.0396 0.0433 0.2442 0.22
21 3szy:A 413 297 0.1283 0.1646 0.2290 0.30 3szz:A, 3t00:A, 3t01:A, 3t02:A
22 4nwj:A 504 92 0.0566 0.0595 0.3261 0.32 4my4:A, 4nwx:A, 4qax:A, 7tl8:A
23 5olt:A 383 34 0.0283 0.0392 0.4412 0.35 5ojh:A
24 4fdi:A 494 76 0.0453 0.0486 0.3158 0.36 4fdi:B, 4fdj:A, 4fdj:B
25 6ust:C 464 57 0.0358 0.0409 0.3333 0.38 6ust:A, 6ust:B, 6ust:D
26 7stt:A 445 67 0.0415 0.0494 0.3284 0.43 7stu:A, 7stv:A
27 8eg3:A 554 64 0.0453 0.0433 0.3750 0.85 1p49:A
28 3igy:B 549 79 0.0396 0.0383 0.2658 1.1 3igz:B
29 3jcs:N 213 121 0.0547 0.1362 0.2397 1.3 6az3:N, 8ovj:N, 8rxh:LN, 8rxx:LN, 5t2a:J
30 5ven:A 382 28 0.0245 0.0340 0.4643 1.4 5ven:B, 5veo:A
31 5vem:A 383 28 0.0245 0.0339 0.4643 1.5 5vem:B, 5vem:C
32 3nvl:A 549 75 0.0434 0.0419 0.3067 2.0 3nvl:B
33 1j71:A 334 53 0.0264 0.0419 0.2642 2.0
34 6s20:C 480 64 0.0396 0.0437 0.3281 2.1
35 6pd0:A 366 26 0.0245 0.0355 0.5000 3.3 6pcz:A, 6pcz:B, 6pd0:B
36 8hlo:A 67 24 0.0208 0.1642 0.4583 3.4 2rqu:A
37 8v4a:A 466 91 0.0491 0.0558 0.2857 4.1 9bnj:A, 9bnj:B, 9bnj:C, 9bnj:D, 8v2k:A, 8v2k:B, 8v2k:C, 8v2k:D, 8v4a:B, 8v4a:C, 8v4a:D, 8v6p:A, 8v6p:B, 8v6p:C, 8v6p:D, 8v9p:A, 8v9p:B, 8v9p:C, 8v9p:D, 5w19:A, 5w19:B, 5w19:C, 5w19:D
38 1ei6:A 404 105 0.0547 0.0718 0.2762 4.5 1ei6:B, 1ei6:C, 1ei6:D
39 5egh:B 393 83 0.0396 0.0534 0.2530 4.5 5ege:A, 5ege:B, 5ege:C, 5ege:D, 5egh:A
40 3b5q:B 467 57 0.0340 0.0385 0.3158 4.6 3b5q:A, 5g2t:A, 5g2t:B, 5g2t:C, 5g2t:D, 5g2u:A
41 8i0k:A 875 109 0.0509 0.0309 0.2477 5.1 8i0k:B, 7wgr:A, 7wgr:B
42 4pvd:A 342 73 0.0434 0.0673 0.3151 6.2 4pvd:B
43 5gz4:A 804 80 0.0396 0.0261 0.2625 7.1 7cba:A, 7cba:B, 5gz5:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218