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BioLiP
>protein
AAQGYPFVPPSWAPSVFVPLTGLVLPAIAMATLFVYIEKEAP

The query sequence (length=42) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7dz7:I 42 42 1.0000 1.0000 1.0000 9.51e-24 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
2 6sl5:I 39 39 0.6667 0.7179 0.7179 2.97e-15
3 7yca:I 35 30 0.5238 0.6286 0.7333 4.08e-10
4 7qco:I 39 32 0.5000 0.5385 0.6562 1.04e-09 7qco:P, 7qco:p, 7qco:i
5 8htu:I 34 30 0.4762 0.5882 0.6667 1.36e-09 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
6 7a4p:I 35 30 0.4524 0.5429 0.6333 1.19e-08 6zzx:I, 6zzy:I
7 6igz:I 32 29 0.4762 0.6250 0.6897 1.55e-08
8 7wfd:AI 33 27 0.4524 0.5758 0.7037 2.09e-08 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
9 8bcv:I 33 27 0.4286 0.5455 0.6667 5.73e-08 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
10 6ly5:i 33 27 0.4048 0.5152 0.6296 2.10e-07 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
11 7dr0:I 30 27 0.4286 0.6000 0.6667 3.52e-07 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
12 6kif:I 38 31 0.4286 0.4737 0.5806 6.05e-07 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
13 7y5e:IN 31 29 0.3810 0.5161 0.5517 3.07e-06 7y5e:I2, 7y7a:I7, 7y7a:Io
14 6l4u:I 35 30 0.3095 0.3714 0.4333 2.28e-05
15 6vpv:I 38 31 0.3810 0.4211 0.5161 2.32e-05 6vpv:i, 6vpv:7
16 7y7b:I 33 30 0.3333 0.4242 0.4667 4.04e-05 7y8a:I
17 8wm6:I 34 30 0.3095 0.3824 0.4333 5.05e-05 8wmj:I, 8wmv:I, 8wmw:I
18 8wey:I 32 29 0.4048 0.5312 0.5862 7.68e-05 7blz:I, 5zgb:I, 5zgh:I
19 6kmw:aI 38 31 0.3095 0.3421 0.4194 5.53e-04 6kmw:cI, 6kmw:bI
20 8am5:i 40 31 0.2857 0.3000 0.3871 6.06e-04 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
21 6k61:I 34 30 0.3333 0.4118 0.4667 0.002 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
22 4fe1:I 38 31 0.3095 0.3421 0.4194 0.002 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
23 7lx0:R 42 31 0.3333 0.3333 0.4516 0.004 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
24 8jjr:i 120 22 0.2857 0.1000 0.5455 0.081
25 6kmx:aI 41 29 0.2619 0.2683 0.3793 0.13 6kmx:cI, 6kmx:bI
26 8jze:i 119 22 0.2857 0.1008 0.5455 0.20 8jzf:i
27 7s3d:I 42 31 0.2381 0.2381 0.3226 0.62 7s3d:i, 7s3d:R
28 8eqm:D 338 32 0.3333 0.0414 0.4375 1.4 8eqm:d, 7sa3:D
29 2iq7:E 339 26 0.2619 0.0324 0.4231 6.5
30 7d41:A 367 28 0.2381 0.0272 0.3571 6.8 7d41:B
31 8h6l:2D 236 22 0.2143 0.0381 0.4091 6.9 8h6k:2D, 8q7n:7, 8qoz:7, 8qpa:7, 8qpb:7, 8qpe:7, 8qzs:7, 8r09:7, 8r0b:7, 8rm5:7
32 7nl1:D 400 17 0.2381 0.0250 0.5882 7.1 8bis:C, 8bis:A, 8biu:G, 8biu:A, 8biv:A, 8biv:E, 8biw:E, 8biw:A, 8bix:C, 8bix:A, 8biz:E, 8biz:A, 7nl1:A, 7nl1:B, 7nl1:C, 7nl1:E, 7nl1:F, 7nl1:G, 7nl1:H
33 1kb0:A 670 23 0.2857 0.0179 0.5217 8.0
34 6f74:A 572 31 0.2143 0.0157 0.2903 8.5 6f74:B, 6f74:C, 6f74:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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