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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDIS
KRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHR
LKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE

The query sequence (length=203) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5jex:A 203 203 1.0000 1.0000 1.0000 6.35e-150 5jez:A, 5jf0:A, 5jf1:A, 5jf2:A, 5jf3:A, 5jf4:A, 5jf5:A, 5jf6:A, 5jf7:A, 5jf8:A
2 6ow7:P 196 202 0.8177 0.8469 0.8218 2.73e-124 2ai7:A, 2aia:A, 2aie:P, 4eox:P, 1lm6:A, 6ow2:P, 6ow7:Q, 3str:P, 3svj:P, 3sw8:P
3 2os3:A 205 203 0.7783 0.7707 0.7783 1.90e-120
4 3l87:A 200 203 0.7537 0.7650 0.7537 1.81e-114
5 3cmd:B 188 199 0.6552 0.7074 0.6683 1.47e-94 3cmd:A, 3g6n:A, 3g6n:B
6 2os1:A 179 192 0.6256 0.7095 0.6615 3.13e-91
7 1lqy:A 184 187 0.5025 0.5543 0.5455 9.78e-67
8 2okl:A 185 184 0.4877 0.5351 0.5380 2.91e-66 2okl:B
9 1lm4:A 190 186 0.4729 0.5053 0.5161 1.93e-59 6jfg:A, 6jfo:A, 6jfq:A, 6jfr:A, 6jfs:A, 1lm4:B, 1lmh:A, 1lqw:A, 1lqw:B, 1q1y:A, 3u7k:A, 3u7l:A, 3u7m:A, 3u7n:A
10 1y6h:A 177 184 0.3005 0.3446 0.3315 3.42e-22 1sv2:A, 1sv2:B, 1szz:A, 1szz:B, 1szz:C, 1szz:D, 1szz:E, 1szz:F, 1szz:G, 1szz:H, 1vev:A, 1vev:B, 1vey:A, 1vey:B, 1vez:A, 1vez:B, 1y6h:B
11 3uwb:A 149 167 0.2857 0.3893 0.3473 7.62e-21 3uwa:A
12 1jym:A 179 182 0.2956 0.3352 0.3297 4.93e-18 1jym:B, 1jym:C, 1jym:D, 1jym:E, 1jym:F, 1jym:G, 1jym:H, 1jym:I, 1jym:J, 1rl4:A, 1rl4:B, 1rqc:A, 1rqc:B, 1rqc:C, 1rqc:D, 1rqc:E, 1rqc:F, 1rqc:G, 1rqc:H, 1rqc:I, 1rqc:J
13 3oca:A 179 145 0.2660 0.3017 0.3724 5.14e-18 3oca:B, 3u04:A
14 6jes:A 159 124 0.2414 0.3082 0.3952 3.32e-17 6jes:B, 6jf3:A, 6jf3:B, 6jf4:B, 6jf4:A, 6jf5:B, 6jf5:A, 6jf6:C, 6jf6:A, 6jf6:B, 6jf6:D, 6jf7:A, 6jf7:B, 6jf8:A, 6jf8:B, 6jf8:C, 6jf8:D
15 4wxl:C 165 135 0.2315 0.2848 0.3481 5.14e-17 4wxl:A, 4wxl:B, 4wxl:D
16 6jfc:B 161 187 0.2709 0.3416 0.2941 1.19e-14 6jfa:A, 6jfc:A, 6jfd:C, 6jfe:B, 6jff:B, 6jfn:B
17 3fwx:A 165 143 0.2217 0.2727 0.3147 2.61e-14 3fwx:B
18 3g5k:A 183 185 0.2463 0.2732 0.2703 2.62e-14 3g5k:B, 3g5k:C, 3g5k:D, 3g5p:A, 3g5p:B, 3g5p:C, 3g5p:D
19 4je6:A 193 181 0.2660 0.2798 0.2983 3.61e-14 4je6:B, 4je7:A, 4je7:B, 4je8:A, 4je8:B, 1zxz:A, 1zxz:B, 1zy0:A, 1zy0:B, 1zy1:A, 1zy1:B
20 3qu1:A 168 134 0.2414 0.2917 0.3657 3.83e-14 3qu1:B
21 3cpm:A 184 138 0.2266 0.2500 0.3333 5.16e-14 3m6o:A, 3m6o:B, 3m6p:A, 3m6p:B, 3m6q:A, 3m6r:A, 3m6r:B, 3m6r:C, 3m6r:D, 3o3j:A, 3pn2:A, 3pn3:A, 3pn3:B, 3pn4:A, 3pn5:A, 3pn6:A, 3pn6:B
22 4dr8:A 188 125 0.2167 0.2340 0.3520 1.81e-13 4dr8:B, 4dr8:C, 4dr8:D, 4dr9:A, 4dr9:B, 4dr9:C, 4dr9:D
23 5kob:A 171 188 0.2709 0.3216 0.2926 3.93e-12 5kob:B, 5kob:C, 5kob:D, 5vcp:A, 5vcp:B, 5vcp:C, 5vcp:D
24 1bs4:A 168 129 0.2069 0.2500 0.3256 7.96e-12 2ai8:A, 2ai8:B, 2ai8:C, 4al2:B, 4al3:A, 4az4:A, 1bs4:B, 1bs4:C, 1bs5:A, 1bs5:B, 1bs5:C, 1bs6:A, 1bs6:B, 1bs6:C, 1bs8:A, 1bs8:B, 1bs8:C, 1bsj:A, 1bsk:A, 1bsz:A, 1bsz:B, 1bsz:C, 7d6z:g, 1def:A, 2def:A, 1dff:A, 1g27:A, 1g27:B, 1g27:C, 1g2a:A, 1g2a:B, 1g2a:C, 3k6l:A, 3k6l:B, 2kmn:A, 1lru:A, 1lru:B, 1lru:C, 8ofe:A, 8rhr:A, 2w3t:A, 2w3u:A, 1xem:A, 1xen:A, 1xeo:A
25 6ck7:A 172 124 0.2217 0.2616 0.3629 1.67e-11 6ck7:B, 6ck7:C, 6ck7:D
26 2ew5:A 166 138 0.2069 0.2530 0.3043 1.74e-11 4e9a:A, 4e9b:A, 2ew6:A, 2ew7:A
27 5mtc:A 137 169 0.2217 0.3285 0.2663 6.39e-11 5mtc:B, 5mtd:A, 5mtd:B, 5mte:A, 5mte:B
28 6jex:A 172 129 0.1970 0.2326 0.3101 1.58e-10 6jer:A, 6jer:B, 6jet:A, 6jet:B, 6jeu:A, 6jeu:B, 6jev:A, 6jev:B, 6jew:A, 6jew:B, 6jex:B
29 5cy7:A 171 188 0.2660 0.3158 0.2872 2.29e-10 5cp0:A, 5cpd:A, 5cvk:A, 5cvp:A, 5cvq:A, 5cwx:A, 5cwy:A, 5cx0:A, 5cxj:A, 5cy8:A, 6ikt:A, 6iky:A, 6il0:A, 6il2:A, 4nt8:A
30 5j46:A 169 147 0.2167 0.2604 0.2993 3.80e-10
31 5hgw:A 174 188 0.2857 0.3333 0.3085 9.49e-10 5hgw:B, 5i2b:A, 5t8z:A
32 1ix1:A 169 175 0.2315 0.2781 0.2686 7.41e-09 1ix1:B, 1lry:A, 1n5n:A, 1n5n:B, 1s17:A, 1s17:B
33 3e3u:A 196 174 0.2365 0.2449 0.2759 1.97e-07
34 1ws1:A 151 143 0.1773 0.2384 0.2517 6.55e-05
35 8bmw:H 275 29 0.0739 0.0545 0.5172 0.81 8bmw:I
36 6cbo:C 411 53 0.0887 0.0438 0.3396 3.8 6cbo:A, 6cbo:B, 6cbo:D, 5z83:A, 5z83:B, 5z8a:A, 5z8a:B, 5z8k:A, 5z8k:B
37 2pa4:B 299 63 0.1034 0.0702 0.3333 7.2 2pa4:A, 2pa4:C, 2pa4:D
38 3a0b:V 137 85 0.0985 0.1460 0.2353 8.3 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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