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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
AAIDECLKNAKVPVTARNSTEWKTDASPFNDRLPYTPAAIAKPATVEHIQAAVLCAAEVGVKANPKSGGHSYASFGLGGE
DGHLVVELDRMYNVTLDPETHIATVQPGARLGHIATVLYEEGKRAFSHGTCPGVGVGGHSLHGGFGFSSHSHGLAVDWIT
SADVVLANGSLVTASETENPDLFWALRGAGSNFGIVASFRFKTFAAPPNVTSYEINLPWTNSSNVVKGWGALQEWLLNGG
MPEEMNMRVLGNAFQTQLQGLYHGNASALKTAIQPLLALLDANLSSVQEHDWMEGFRHYAYSGEIDITDPGYDQSETFYS
KSLVTSALPPDVLERVAEYWIETANKVRRSWYIIIDMYGGPNSAVTRVPPGAGSYAFRDPERHLFLYELYDRSFGPYPDD
GFAFLDGWVHAFTGGLDSSDWGMYINYADPGLDRAEAQEVYYRQNLDRLRRIKQQLDPTELFYYPQAVEPAEV

The query sequence (length=473) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5k8e:A 473 473 1.0000 1.0000 1.0000 0.0 5l6f:A, 5l6g:A
2 3rj8:A 473 481 0.4778 0.4778 0.4699 2.32e-144 3rja:A
3 6yjo:A 475 481 0.4503 0.4484 0.4428 4.98e-130
4 6y0r:AAA 468 472 0.4186 0.4231 0.4195 1.35e-121
5 2axr:A 479 479 0.4440 0.4384 0.4384 9.84e-114 3hsu:A, 1zr6:A
6 6eo4:A 463 474 0.2981 0.3045 0.2975 1.41e-55 6eo4:B, 6eo5:A, 6eo5:B
7 6yji:A 477 473 0.2622 0.2600 0.2622 8.60e-43 6yji:B
8 4pve:A 490 489 0.2706 0.2612 0.2618 4.98e-31 4pvh:A, 4pvj:A, 4pvk:A, 4pwb:A, 4pwc:A, 3tsh:A, 3tsj:A, 3tsj:B
9 4dns:A 486 462 0.2600 0.2531 0.2662 7.13e-29 4dns:B
10 3vte:A 502 460 0.2474 0.2331 0.2543 1.56e-27
11 6jqh:B 513 476 0.2622 0.2417 0.2605 8.77e-26 6jqh:A
12 4ud8:A 500 516 0.2558 0.2420 0.2345 1.13e-25 4ud8:B
13 3w8w:B 461 495 0.2770 0.2842 0.2646 1.72e-25 6foq:A, 6foq:B, 6foq:C, 6foq:D, 6fow:A, 6fow:B, 6fow:C, 6fow:D, 6fp3:A, 6fp3:B, 6fp3:C, 6fp3:D, 6fy8:A, 6fy9:A, 6fya:A, 6fya:B, 6fyb:A, 6fyb:B, 6fyb:C, 6fyb:D, 6fyc:A, 6fyc:B, 6fyd:A, 6fyd:B, 6fyd:C, 6fyd:D, 6fye:A, 6fye:B, 6fyf:A, 6fyf:B, 6fyf:C, 6fyf:D, 6fyg:A, 6fyg:B, 6fyg:C, 6fyg:D, 3w8w:A, 3w8x:A, 3w8x:B, 3w8z:A, 3w8z:B, 4xlo:A, 4xlo:B, 4xlo:C, 4xlo:D
14 8ate:A 502 475 0.2579 0.2430 0.2568 4.07e-25
15 7yav:A 501 476 0.2495 0.2355 0.2479 2.70e-24 7yav:B
16 3d2j:A 502 470 0.2410 0.2271 0.2426 2.71e-24 3d2d:A, 3d2h:A, 4ec3:A, 3fw7:A, 3fw8:A, 3fw9:A, 3fwa:A, 3gsy:A, 4pzf:A, 4pzf:B, 4pzf:C, 4pzf:D
17 5d79:A 498 508 0.2664 0.2530 0.2480 5.31e-24 5d79:B
18 2bvf:A 453 171 0.1205 0.1258 0.3333 1.34e-19 2bvf:B, 2bvg:A, 2bvg:B, 2bvg:C, 2bvg:D, 2bvh:A, 2bvh:B, 2bvh:C, 2bvh:D
19 7e2v:A 500 469 0.2178 0.2060 0.2196 3.01e-18 7e2v:B
20 2ipi:A 492 508 0.2748 0.2642 0.2559 2.90e-12 2ipi:B, 2ipi:C, 2ipi:D
21 7zzk:B 489 508 0.2495 0.2413 0.2323 9.09e-12 7zzk:A
22 6f72:A 548 190 0.1268 0.1095 0.3158 6.94e-10 6f73:A, 6f73:B
23 6f72:A 548 34 0.0275 0.0237 0.3824 1.4 6f73:A, 6f73:B
24 6f74:A 572 76 0.0592 0.0490 0.3684 2.14e-08 6f74:B, 6f74:C, 6f74:D
25 2y08:B 500 163 0.1078 0.1020 0.3129 2.31e-08 2y08:A, 2y3r:A, 2y3r:B, 2y3r:C, 2y3r:D, 2y3s:A, 2y3s:B, 2y4g:A, 2y4g:B
26 2y08:B 500 72 0.0486 0.0460 0.3194 2.6 2y08:A, 2y3r:A, 2y3r:B, 2y3r:C, 2y3r:D, 2y3s:A, 2y3s:B, 2y4g:A, 2y4g:B
27 4ml8:A 488 196 0.1163 0.1127 0.2806 3.15e-08 4ml8:B, 4ml8:C, 4ml8:D, 4mla:A
28 3pop:A 493 505 0.2558 0.2454 0.2396 3.25e-08 3pop:B, 3pop:C, 3pop:D, 3pqb:A, 3pqb:B, 3pqb:C, 3pqb:D
29 5i1v:A 498 186 0.1290 0.1225 0.3280 3.33e-08 5i1v:B, 5i1v:C, 5i1v:D, 5i1w:A, 5i1w:B, 5i1w:C, 5i1w:D
30 5i1v:A 498 74 0.0507 0.0482 0.3243 0.009 5i1v:B, 5i1v:C, 5i1v:D, 5i1w:A, 5i1w:B, 5i1w:C, 5i1w:D
31 4mla:B 460 196 0.1163 0.1196 0.2806 3.55e-08
32 8ck6:A 499 226 0.1311 0.1242 0.2743 1.74e-07 8cj9:A, 8cj9:B, 6yaq:A
33 4oal:A 444 82 0.0634 0.0676 0.3659 1.98e-07 4oal:B
34 4o95:A 467 194 0.1226 0.1242 0.2990 2.54e-07 8ckq:A, 8ckt:A, 8clw:A, 8cm2:A, 5hhz:A, 5hmr:A, 5hqx:A, 6yao:A, 6yap:A
35 2exr:A 491 186 0.1099 0.1059 0.2796 3.44e-07 2q4w:A
36 3pm9:A 465 189 0.1078 0.1097 0.2698 8.91e-07 3pm9:B, 3pm9:C, 3pm9:D, 3pm9:E, 3pm9:F
37 8qnc:A 486 168 0.0930 0.0905 0.2619 3.46e-06 8qmy:A, 8qmy:B, 8qmy:C, 8qnb:A, 8qnr:A
38 1dii:A 515 230 0.1057 0.0971 0.2174 1.01e-05 1dii:B, 1diq:A, 1diq:B, 1wve:A, 1wve:B, 1wvf:A
39 5awv:B 498 182 0.1099 0.1044 0.2857 7.85e-05 5awv:C, 5awv:A, 5awv:D, 2wdw:A, 2wdw:B
40 5awv:B 498 73 0.0613 0.0582 0.3973 2.35e-04 5awv:C, 5awv:A, 5awv:D, 2wdw:A, 2wdw:B
41 8ot8:A 412 149 0.0867 0.0995 0.2752 1.40e-04 8ot8:B, 8ot8:C, 8ot8:D
42 7pbg:A 525 231 0.1121 0.1010 0.2294 2.42e-04 7pbg:B, 7pbi:A, 7pbi:B, 7pbi:C, 7pbi:D, 7pbi:E, 7pbi:F, 7pbi:G, 7pbi:H
43 6hfw:A 429 187 0.1078 0.1189 0.2727 3.87e-04 4fdn:A, 4fdo:A, 4fdp:A, 4fdp:B, 4feh:A, 4ff6:A, 4ff6:B, 6g83:A, 6g83:B, 6hez:A, 6hez:B, 6hf0:A, 6hf0:B, 6hf3:A, 6hf3:B, 6hfv:A, 6hfv:B, 6hfw:B, 4kw5:A, 4kw5:B, 4ncr:A, 4ncr:B, 5oel:B, 5oep:A, 5oep:B, 5oeq:A, 5oeq:B, 4p8c:B, 4p8h:A, 4p8h:B, 4p8k:B, 4p8l:B, 4p8m:A, 4p8n:B, 4p8p:B, 4p8t:B, 4p8y:B, 4pfa:A, 4pfa:B, 4pfd:A
44 6c80:B 486 178 0.0951 0.0926 0.2528 5.73e-04 6c80:A
45 3s1e:A 499 72 0.0486 0.0461 0.3194 6.72e-04 3bw7:A, 3c0p:A, 3dq0:A, 3kjm:A, 2qkn:A, 2qpm:A, 3s1c:A, 3s1d:A, 3s1f:A, 1w1o:A, 1w1q:A, 1w1r:A, 1w1s:A
46 4aut:A 419 194 0.1163 0.1313 0.2835 0.010 4f4q:A
47 4p8l:A 457 156 0.0888 0.0919 0.2692 0.069 5oel:A, 4p8c:A, 4p8k:A, 4p8n:A, 4p8p:A, 4p8t:A, 4p8y:A
48 4pfd:B 410 156 0.0888 0.1024 0.2692 0.092 4p8m:B
49 7qh2:C 467 94 0.0571 0.0578 0.2872 0.66 7qh2:F
50 2dw6:A 388 47 0.0423 0.0515 0.4255 2.6 2dw6:B, 2dw6:C, 2dw6:D, 2dw7:A, 2dw7:B, 2dw7:C, 2dw7:D, 2dw7:E, 2dw7:F, 2dw7:G, 2dw7:H, 2dw7:I, 2dw7:J, 2dw7:K, 2dw7:L, 2dw7:M, 2dw7:N, 2dw7:O, 2dw7:P, 1tzz:A, 1tzz:B
51 1g6k:A 261 82 0.0486 0.0881 0.2805 4.0 1g6k:B, 1g6k:E, 1g6k:F, 1gco:A, 1gco:B, 1gco:E, 1gco:F, 1gee:A, 1gee:B, 1gee:E, 1gee:F, 1rwb:A, 1rwb:B, 1rwb:E, 1rwb:F
52 8f8k:A 353 68 0.0402 0.0538 0.2794 4.4 8f8l:A
53 5z9j:C 392 106 0.0571 0.0689 0.2547 4.5 5z9i:A, 5z9j:A, 5z9j:D
54 5g5y:A 494 77 0.0465 0.0445 0.2857 5.6 5g5y:B, 5g5z:A, 5g5z:B, 5g5z:C, 5g5z:D, 5g60:A, 5g60:B, 5g60:C, 5g60:D, 5g61:A, 5g61:B, 5g61:C, 5g61:D, 5g62:A, 5g62:B
55 4q5k:A 237 69 0.0381 0.0759 0.2609 6.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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