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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 9b36:A (4.29) BS01 GAL ? N/A P42260 38778115
    2 9b36:A (4.29) BS02 2J9 ? N/A P42260 38778115
    3 9b36:A (4.29) BS03 GLU ? N/A P42260 38778115
    4 9b36:A (4.29) BS04 CLR ? N/A P42260 38778115
    5 9b36:A (4.29) BS05 CLR ? N/A P42260 38778115
    6 9b36:A (4.29) BS06 2J9 ? N/A P42260 38778115
    7 9b36:B (4.29) BS01 2J9 ? N/A P42260 38778115
    8 9b36:B (4.29) BS02 GLU ? N/A P42260 38778115
    9 9b36:B (4.29) BS03 2J9 ? N/A P42260 38778115
    10 9b36:C (4.29) BS01 MAN ? N/A P42260 38778115
    11 9b36:C (4.29) BS02 2J9 ? N/A P42260 38778115
    12 9b36:C (4.29) BS03 CLR ? N/A P42260 38778115
    13 9b36:C (4.29) BS04 2J9 ? N/A P42260 38778115
    14 9b36:C (4.29) BS05 GLU ? N/A P42260 38778115
    15 9b36:C (4.29) BS06 CLR ? N/A P42260 38778115
    16 9b36:D (4.29) BS01 2J9 ? N/A P42260 38778115
    17 9b36:D (4.29) BS02 2J9 ? N/A P42260 38778115
    18 9b36:D (4.29) BS03 GLU ? N/A P42260 38778115
    19 9b36:E (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    20 9b36:E (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    21 9b36:E (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    22 9b36:F (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    23 9b36:F (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    24 9b36:F (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    25 9b36:G (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    26 9b36:G (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    27 9b36:G (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    28 9b36:H (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    29 9b36:H (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    30 9b36:H (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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