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BioLiP
Download all results in tab-seperated text for 59 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8tfk:A (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    2 8tfk:A (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    3 8tfk:A (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    4 8tfk:A (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    5 8tfk:A (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    6 8tfk:B (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    7 8tfk:B (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    8 8tfk:B (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    9 8tfk:B (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    10 8tfk:B (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    11 8tfk:C (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    12 8tfk:C (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    13 8tfk:C (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    14 8tfk:C (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    15 8tfk:C (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    16 8tfk:D (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    17 8tfk:D (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    18 8tfk:D (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    19 8tfk:D (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    20 8tfk:D (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    21 8tfk:E (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    22 8tfk:E (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    23 8tfk:E (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    24 8tfk:E (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    25 8tfk:E (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    26 8tfk:F (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    27 8tfk:F (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    28 8tfk:F (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    29 8tfk:F (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    30 8tfk:F (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    31 8tfk:G (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    32 8tfk:G (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    33 8tfk:G (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    34 8tfk:G (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    35 8tfk:G (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    36 8tfk:H (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    37 8tfk:H (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    38 8tfk:H (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    39 8tfk:H (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    40 8tfk:H (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    41 8tfk:I (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    42 8tfk:I (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    43 8tfk:I (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    44 8tfk:I (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    45 8tfk:I (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    46 8tfk:J (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    47 8tfk:J (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    48 8tfk:J (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    49 8tfk:J (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    50 8tfk:J (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    51 8tfk:K (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    52 8tfk:K (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    53 8tfk:K (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    54 8tfk:K (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    55 8tfk:L (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    56 8tfk:L (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    57 8tfk:L (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    58 8tfk:L (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    59 8tfk:L (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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