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BioLiP
Download all results in tab-seperated text for 27 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8phu:AC (7.41) BS01 peptide N/A N/A N/A 37866476
    2 8phu:BK (7.41) BS01 peptide N/A N/A N/A 37866476
    3 8phu:BU (7.41) BS01 peptide N/A N/A N/A 37866476
    4 8phu:BV (7.41) BS01 peptide N/A N/A N/A 37866476
    5 8phu:CD (7.41) BS01 peptide N/A N/A N/A 37866476
    6 8phu:CN (7.41) BS01 peptide N/A N/A N/A 37866476
    7 8phu:DC (7.41) BS01 peptide N/A N/A N/A 37866476
    8 8phu:EK (7.41) BS01 peptide N/A N/A N/A 37866476
    9 8phu:EV (7.41) BS01 peptide N/A N/A N/A 37866476
    10 8phu:FD (7.41) BS01 peptide N/A N/A N/A 37866476
    11 8phu:FN (7.41) BS01 peptide N/A N/A N/A 37866476
    12 8phu:GC (7.41) BS01 peptide N/A N/A N/A 37866476
    13 8phu:HK (7.41) BS01 peptide N/A N/A N/A 37866476
    14 8phu:HV (7.41) BS01 peptide N/A N/A N/A 37866476
    15 8phu:ID (7.41) BS01 peptide N/A N/A N/A 37866476
    16 8phu:IN (7.41) BS01 peptide N/A N/A N/A 37866476
    17 8phu:JC (7.41) BS01 peptide N/A N/A N/A 37866476
    18 8phu:KK (7.41) BS01 peptide N/A N/A N/A 37866476
    19 8phu:KV (7.41) BS01 peptide N/A N/A N/A 37866476
    20 8phu:LD (7.41) BS01 peptide N/A N/A N/A 37866476
    21 8phu:LN (7.41) BS01 peptide N/A N/A N/A 37866476
    22 8phu:MC (7.41) BS01 peptide N/A N/A N/A 37866476
    23 8phu:NK (7.41) BS01 peptide N/A N/A N/A 37866476
    24 8phu:NU (7.41) BS01 peptide N/A N/A N/A 37866476
    25 8phu:NV (7.41) BS01 peptide N/A N/A N/A 37866476
    26 8phu:OD (7.41) BS01 peptide N/A N/A N/A 37866476
    27 8phu:ON (7.41) BS01 peptide N/A N/A N/A 37866476
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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