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BioLiP
Download all results in tab-seperated text for 56 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8oh9:A (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    2 8oh9:B (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    3 8oh9:B (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    4 8oh9:B (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    5 8oh9:B (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    6 8oh9:B (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    7 8oh9:C (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    8 8oh9:C (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    9 8oh9:C (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    10 8oh9:C (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    11 8oh9:C (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    12 8oh9:C (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    13 8oh9:C (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    14 8oh9:C (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    15 8oh9:D (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    16 8oh9:E (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    17 8oh9:E (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    18 8oh9:E (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    19 8oh9:E (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    20 8oh9:E (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    21 8oh9:F (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    22 8oh9:F (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    23 8oh9:F (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    24 8oh9:F (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    25 8oh9:F (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    26 8oh9:F (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    27 8oh9:F (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    28 8oh9:F (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    29 8oh9:G (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    30 8oh9:H (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    31 8oh9:H (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    32 8oh9:H (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    33 8oh9:H (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    34 8oh9:H (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    35 8oh9:I (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    36 8oh9:I (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    37 8oh9:I (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    38 8oh9:I (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    39 8oh9:I (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    40 8oh9:I (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    41 8oh9:I (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    42 8oh9:I (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    43 8oh9:J (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    44 8oh9:K (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    45 8oh9:K (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    46 8oh9:K (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    47 8oh9:K (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    48 8oh9:K (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    49 8oh9:L (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    50 8oh9:L (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    51 8oh9:L (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    52 8oh9:L (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    53 8oh9:L (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    54 8oh9:L (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    55 8oh9:L (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    56 8oh9:L (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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