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BioLiP
Download all results in tab-seperated text for 100 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8juu:A (3.8) BS01 peptide N/A N/A P98158 38771880
    2 8juu:A (3.8) BS02 peptide N/A N/A P98158 38771880
    3 8juu:A (3.8) BS03 peptide N/A N/A P98158 38771880
    4 8juu:A (3.8) BS04 peptide N/A N/A P98158 38771880
    5 8juu:A (3.8) BS05 peptide N/A N/A P98158 38771880
    6 8juu:A (3.8) BS06 peptide N/A N/A P98158 38771880
    7 8juu:A (3.8) BS07 peptide N/A N/A P98158 38771880
    8 8juu:A (3.8) BS08 CA N/A N/A P98158 38771880
    9 8juu:A (3.8) BS09 CA N/A N/A P98158 38771880
    10 8juu:A (3.8) BS10 CA N/A N/A P98158 38771880
    11 8juu:A (3.8) BS11 CA N/A N/A P98158 38771880
    12 8juu:A (3.8) BS12 CA N/A N/A P98158 38771880
    13 8juu:A (3.8) BS13 CA N/A N/A P98158 38771880
    14 8juu:A (3.8) BS14 CA N/A N/A P98158 38771880
    15 8juu:A (3.8) BS15 CA N/A N/A P98158 38771880
    16 8juu:A (3.8) BS16 CA N/A N/A P98158 38771880
    17 8juu:A (3.8) BS17 CA N/A N/A P98158 38771880
    18 8juu:A (3.8) BS18 CA N/A N/A P98158 38771880
    19 8juu:A (3.8) BS19 CA N/A N/A P98158 38771880
    20 8juu:A (3.8) BS20 CA N/A N/A P98158 38771880
    21 8juu:A (3.8) BS21 CA N/A N/A P98158 38771880
    22 8juu:A (3.8) BS22 CA N/A N/A P98158 38771880
    23 8juu:A (3.8) BS23 CA N/A N/A P98158 38771880
    24 8juu:A (3.8) BS24 CA N/A N/A P98158 38771880
    25 8juu:A (3.8) BS25 CA N/A N/A P98158 38771880
    26 8juu:A (3.8) BS26 CA N/A N/A P98158 38771880
    27 8juu:A (3.8) BS27 CA N/A N/A P98158 38771880
    28 8juu:A (3.8) BS28 CA N/A N/A P98158 38771880
    29 8juu:A (3.8) BS29 CA N/A N/A P98158 38771880
    30 8juu:A (3.8) BS30 CA N/A N/A P98158 38771880
    31 8juu:A (3.8) BS31 CA N/A N/A P98158 38771880
    32 8juu:A (3.8) BS32 CA N/A N/A P98158 38771880
    33 8juu:A (3.8) BS33 CA N/A N/A P98158 38771880
    34 8juu:A (3.8) BS34 CA N/A N/A P98158 38771880
    35 8juu:A (3.8) BS35 CA N/A N/A P98158 38771880
    36 8juu:A (3.8) BS36 CA N/A N/A P98158 38771880
    37 8juu:A (3.8) BS37 CA N/A N/A P98158 38771880
    38 8juu:A (3.8) BS38 CA N/A N/A P98158 38771880
    39 8juu:A (3.8) BS39 CA N/A N/A P98158 38771880
    40 8juu:A (3.8) BS40 CA N/A N/A P98158 38771880
    41 8juu:A (3.8) BS41 CA N/A N/A P98158 38771880
    42 8juu:A (3.8) BS42 CA N/A N/A P98158 38771880
    43 8juu:A (3.8) BS43 CA N/A N/A P98158 38771880
    44 8juu:A (3.8) BS44 CA N/A N/A P98158 38771880
    45 8juu:A (3.8) BS45 CA N/A N/A P98158 38771880
    46 8juu:A (3.8) BS46 CA N/A N/A P98158 38771880
    47 8juu:A (3.8) BS47 CA N/A N/A P98158 38771880
    48 8juu:A (3.8) BS48 CA N/A N/A P98158 38771880
    49 8juu:A (3.8) BS49 CA N/A N/A P98158 38771880
    50 8juu:A (3.8) BS50 CA N/A N/A P98158 38771880
    51 8juu:B (3.8) BS01 peptide N/A N/A P98158 38771880
    52 8juu:B (3.8) BS02 peptide N/A N/A P98158 38771880
    53 8juu:B (3.8) BS03 peptide N/A N/A P98158 38771880
    54 8juu:B (3.8) BS04 peptide N/A N/A P98158 38771880
    55 8juu:B (3.8) BS05 peptide N/A N/A P98158 38771880
    56 8juu:B (3.8) BS06 peptide N/A N/A P98158 38771880
    57 8juu:B (3.8) BS07 CA N/A N/A P98158 38771880
    58 8juu:B (3.8) BS08 CA N/A N/A P98158 38771880
    59 8juu:B (3.8) BS09 CA N/A N/A P98158 38771880
    60 8juu:B (3.8) BS10 CA N/A N/A P98158 38771880
    61 8juu:B (3.8) BS11 CA N/A N/A P98158 38771880
    62 8juu:B (3.8) BS12 CA N/A N/A P98158 38771880
    63 8juu:B (3.8) BS13 CA N/A N/A P98158 38771880
    64 8juu:B (3.8) BS14 CA N/A N/A P98158 38771880
    65 8juu:B (3.8) BS15 CA N/A N/A P98158 38771880
    66 8juu:B (3.8) BS16 CA N/A N/A P98158 38771880
    67 8juu:B (3.8) BS17 CA N/A N/A P98158 38771880
    68 8juu:B (3.8) BS18 CA N/A N/A P98158 38771880
    69 8juu:B (3.8) BS19 CA N/A N/A P98158 38771880
    70 8juu:B (3.8) BS20 CA N/A N/A P98158 38771880
    71 8juu:B (3.8) BS21 CA N/A N/A P98158 38771880
    72 8juu:B (3.8) BS22 CA N/A N/A P98158 38771880
    73 8juu:B (3.8) BS23 CA N/A N/A P98158 38771880
    74 8juu:B (3.8) BS24 CA N/A N/A P98158 38771880
    75 8juu:B (3.8) BS25 CA N/A N/A P98158 38771880
    76 8juu:B (3.8) BS26 CA N/A N/A P98158 38771880
    77 8juu:B (3.8) BS27 CA N/A N/A P98158 38771880
    78 8juu:B (3.8) BS28 CA N/A N/A P98158 38771880
    79 8juu:B (3.8) BS29 CA N/A N/A P98158 38771880
    80 8juu:B (3.8) BS30 CA N/A N/A P98158 38771880
    81 8juu:B (3.8) BS31 CA N/A N/A P98158 38771880
    82 8juu:B (3.8) BS32 CA N/A N/A P98158 38771880
    83 8juu:B (3.8) BS33 CA N/A N/A P98158 38771880
    84 8juu:B (3.8) BS34 CA N/A N/A P98158 38771880
    85 8juu:B (3.8) BS35 CA N/A N/A P98158 38771880
    86 8juu:B (3.8) BS36 CA N/A N/A P98158 38771880
    87 8juu:B (3.8) BS37 CA N/A N/A P98158 38771880
    88 8juu:B (3.8) BS38 CA N/A N/A P98158 38771880
    89 8juu:B (3.8) BS39 CA N/A N/A P98158 38771880
    90 8juu:B (3.8) BS40 CA N/A N/A P98158 38771880
    91 8juu:B (3.8) BS41 CA N/A N/A P98158 38771880
    92 8juu:B (3.8) BS42 CA N/A N/A P98158 38771880
    93 8juu:B (3.8) BS43 CA N/A N/A P98158 38771880
    94 8juu:B (3.8) BS44 CA N/A N/A P98158 38771880
    95 8juu:B (3.8) BS45 CA N/A N/A P98158 38771880
    96 8juu:B (3.8) BS46 CA N/A N/A P98158 38771880
    97 8juu:B (3.8) BS47 CA N/A N/A P98158 38771880
    98 8juu:B (3.8) BS48 CA N/A N/A P98158 38771880
    99 8juu:B (3.8) BS49 CA N/A N/A P98158 38771880
    100 8juu:B (3.8) BS50 CA N/A N/A P98158 38771880
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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