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BioLiP
Download all results in tab-seperated text for 47 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8iwx:G (2.59) BS01 CHL ? GO:0009765 ... P12333 37653340
    2 8iwx:G (2.59) BS02 CLA ? GO:0009765 ... P12333 37653340
    3 8iwx:G (2.59) BS03 CLA ? GO:0009765 ... P12333 37653340
    4 8iwx:G (2.59) BS04 CHL ? GO:0009765 ... P12333 37653340
    5 8iwx:G (2.59) BS05 CHL ? GO:0009765 ... P12333 37653340
    6 8iwx:G (2.59) BS06 CHL ? GO:0009765 ... P12333 37653340
    7 8iwx:G (2.59) BS07 CHL ? GO:0009765 ... P12333 37653340
    8 8iwx:G (2.59) BS08 CHL ? GO:0009765 ... P12333 37653340
    9 8iwx:G (2.59) BS09 CLA ? GO:0009765 ... P12333 37653340
    10 8iwx:G (2.59) BS10 CLA ? GO:0009765 ... P12333 37653340
    11 8iwx:G (2.59) BS11 CLA ? GO:0009765 ... P12333 37653340
    12 8iwx:G (2.59) BS12 CLA ? GO:0009765 ... P12333 37653340
    13 8iwx:G (2.59) BS13 CLA ? GO:0009765 ... P12333 37653340
    14 8iwx:G (2.59) BS14 CHL ? GO:0009765 ... P12333 37653340
    15 8iwx:N (2.59) BS01 CHL ? GO:0009765 ... P12333 37653340
    16 8iwx:N (2.59) BS02 CLA ? GO:0009765 ... P12333 37653340
    17 8iwx:N (2.59) BS03 CLA ? GO:0009765 ... P12333 37653340
    18 8iwx:N (2.59) BS04 CLA ? GO:0009765 ... P12333 37653340
    19 8iwx:N (2.59) BS05 CHL ? GO:0009765 ... P12333 37653340
    20 8iwx:N (2.59) BS06 CHL ? GO:0009765 ... P12333 37653340
    21 8iwx:N (2.59) BS07 CHL ? GO:0009765 ... P12333 37653340
    22 8iwx:N (2.59) BS08 CHL ? GO:0009765 ... P12333 37653340
    23 8iwx:N (2.59) BS09 CHL ? GO:0009765 ... P12333 37653340
    24 8iwx:N (2.59) BS10 CLA ? GO:0009765 ... P12333 37653340
    25 8iwx:N (2.59) BS11 CLA ? GO:0009765 ... P12333 37653340
    26 8iwx:N (2.59) BS12 CLA ? GO:0009765 ... P12333 37653340
    27 8iwx:N (2.59) BS13 CLA ? GO:0009765 ... P12333 37653340
    28 8iwx:N (2.59) BS14 CLA ? GO:0009765 ... P12333 37653340
    29 8iwx:N (2.59) BS15 CHL ? GO:0009765 ... P12333 37653340
    30 8iwx:N (2.59) BS16 CHL ? GO:0009765 ... P12333 37653340
    31 8iwx:N (2.59) BS17 CLA ? GO:0009765 ... P12333 37653340
    32 8iwx:Y (2.59) BS01 CHL ? GO:0009765 ... P12333 37653340
    33 8iwx:Y (2.59) BS02 CHL ? GO:0009765 ... P12333 37653340
    34 8iwx:Y (2.59) BS03 CHL ? GO:0009765 ... P12333 37653340
    35 8iwx:Y (2.59) BS04 CLA ? GO:0009765 ... P12333 37653340
    36 8iwx:Y (2.59) BS05 CLA ? GO:0009765 ... P12333 37653340
    37 8iwx:Y (2.59) BS06 CLA ? GO:0009765 ... P12333 37653340
    38 8iwx:Y (2.59) BS07 CHL ? GO:0009765 ... P12333 37653340
    39 8iwx:Y (2.59) BS08 CHL ? GO:0009765 ... P12333 37653340
    40 8iwx:Y (2.59) BS09 CHL ? GO:0009765 ... P12333 37653340
    41 8iwx:Y (2.59) BS10 CHL ? GO:0009765 ... P12333 37653340
    42 8iwx:Y (2.59) BS11 CHL ? GO:0009765 ... P12333 37653340
    43 8iwx:Y (2.59) BS12 CLA ? GO:0009765 ... P12333 37653340
    44 8iwx:Y (2.59) BS13 CLA ? GO:0009765 ... P12333 37653340
    45 8iwx:Y (2.59) BS14 CLA ? GO:0009765 ... P12333 37653340
    46 8iwx:Y (2.59) BS15 CLA ? GO:0009765 ... P12333 37653340
    47 8iwx:Y (2.59) BS16 CLA ? GO:0009765 ... P12333 37653340
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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