Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 59 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8io9:A (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    2 8io9:A (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    3 8io9:A (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    4 8io9:A (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    5 8io9:A (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    6 8io9:B (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    7 8io9:B (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    8 8io9:B (2.36) BS03 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    9 8io9:B (2.36) BS04 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    10 8io9:B (2.36) BS05 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    11 8io9:C (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    12 8io9:C (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    13 8io9:C (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    14 8io9:C (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    15 8io9:C (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    16 8io9:D (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    17 8io9:D (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    18 8io9:D (2.36) BS03 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    19 8io9:D (2.36) BS04 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    20 8io9:D (2.36) BS05 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    21 8io9:E (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    22 8io9:E (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    23 8io9:E (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    24 8io9:E (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    25 8io9:E (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    26 8io9:F (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    27 8io9:F (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    28 8io9:F (2.36) BS03 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    29 8io9:F (2.36) BS04 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    30 8io9:F (2.36) BS05 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    31 8io9:G (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    32 8io9:G (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    33 8io9:G (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    34 8io9:G (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    35 8io9:G (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    36 8io9:H (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    37 8io9:H (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    38 8io9:H (2.36) BS03 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    39 8io9:H (2.36) BS04 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    40 8io9:H (2.36) BS05 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    41 8io9:I (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    42 8io9:I (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    43 8io9:I (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    44 8io9:I (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    45 8io9:I (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    46 8io9:J (2.36) BS01 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    47 8io9:J (2.36) BS02 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    48 8io9:J (2.36) BS03 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    49 8io9:J (2.36) BS04 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    50 8io9:K (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    51 8io9:K (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    52 8io9:K (2.36) BS03 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    53 8io9:K (2.36) BS04 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    54 8io9:K (2.36) BS05 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    55 8io9:L (2.36) BS01 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    56 8io9:L (2.36) BS02 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    57 8io9:L (2.36) BS03 ANP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    58 8io9:L (2.36) BS04 TPP 4.1.2.- GO:0003824 ... Q31LF9 37349485
    59 8io9:L (2.36) BS05 MG 4.1.2.- GO:0003824 ... Q31LF9 37349485
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218