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BioLiP
Download all results in tab-seperated text for 62 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8hlv:A (2.55) BS01 0UR N/A GO:0009765 ... N/A 37633266
    2 8hlv:A (2.55) BS02 0IE N/A GO:0009765 ... N/A 37633266
    3 8hlv:A (2.55) BS03 0IE N/A GO:0009765 ... N/A 37633266
    4 8hlv:A (2.55) BS04 CHL N/A GO:0009765 ... N/A 37633266
    5 8hlv:A (2.55) BS05 CHL N/A GO:0009765 ... N/A 37633266
    6 8hlv:A (2.55) BS06 CLA N/A GO:0009765 ... N/A 37633266
    7 8hlv:A (2.55) BS07 CLA N/A GO:0009765 ... N/A 37633266
    8 8hlv:A (2.55) BS08 CHL N/A GO:0009765 ... N/A 37633266
    9 8hlv:A (2.55) BS09 CHL N/A GO:0009765 ... N/A 37633266
    10 8hlv:A (2.55) BS10 CHL N/A GO:0009765 ... N/A 37633266
    11 8hlv:A (2.55) BS11 CHL N/A GO:0009765 ... N/A 37633266
    12 8hlv:A (2.55) BS12 CHL N/A GO:0009765 ... N/A 37633266
    13 8hlv:A (2.55) BS13 CLA N/A GO:0009765 ... N/A 37633266
    14 8hlv:A (2.55) BS14 CLA N/A GO:0009765 ... N/A 37633266
    15 8hlv:A (2.55) BS15 CLA N/A GO:0009765 ... N/A 37633266
    16 8hlv:A (2.55) BS16 CLA N/A GO:0009765 ... N/A 37633266
    17 8hlv:A (2.55) BS17 CHL N/A GO:0009765 ... N/A 37633266
    18 8hlv:A (2.55) BS18 0IE N/A GO:0009765 ... N/A 37633266
    19 8hlv:A (2.55) BS19 CHL N/A GO:0009765 ... N/A 37633266
    20 8hlv:A (2.55) BS20 CHL N/A GO:0009765 ... N/A 37633266
    21 8hlv:A (2.55) BS21 CHL N/A GO:0009765 ... N/A 37633266
    22 8hlv:B (2.55) BS01 CHL N/A GO:0009765 ... N/A 37633266
    23 8hlv:B (2.55) BS02 CHL N/A GO:0009765 ... N/A 37633266
    24 8hlv:B (2.55) BS03 0UR N/A GO:0009765 ... N/A 37633266
    25 8hlv:B (2.55) BS04 0IE N/A GO:0009765 ... N/A 37633266
    26 8hlv:B (2.55) BS05 0IE N/A GO:0009765 ... N/A 37633266
    27 8hlv:B (2.55) BS06 CHL N/A GO:0009765 ... N/A 37633266
    28 8hlv:B (2.55) BS07 CHL N/A GO:0009765 ... N/A 37633266
    29 8hlv:B (2.55) BS08 CLA N/A GO:0009765 ... N/A 37633266
    30 8hlv:B (2.55) BS09 CLA N/A GO:0009765 ... N/A 37633266
    31 8hlv:B (2.55) BS10 CHL N/A GO:0009765 ... N/A 37633266
    32 8hlv:B (2.55) BS11 CHL N/A GO:0009765 ... N/A 37633266
    33 8hlv:B (2.55) BS12 CHL N/A GO:0009765 ... N/A 37633266
    34 8hlv:B (2.55) BS13 CHL N/A GO:0009765 ... N/A 37633266
    35 8hlv:B (2.55) BS14 CHL N/A GO:0009765 ... N/A 37633266
    36 8hlv:B (2.55) BS15 CLA N/A GO:0009765 ... N/A 37633266
    37 8hlv:B (2.55) BS16 CLA N/A GO:0009765 ... N/A 37633266
    38 8hlv:B (2.55) BS17 CLA N/A GO:0009765 ... N/A 37633266
    39 8hlv:B (2.55) BS18 CLA N/A GO:0009765 ... N/A 37633266
    40 8hlv:B (2.55) BS19 CHL N/A GO:0009765 ... N/A 37633266
    41 8hlv:B (2.55) BS20 0IE N/A GO:0009765 ... N/A 37633266
    42 8hlv:B (2.55) BS21 CHL N/A GO:0009765 ... N/A 37633266
    43 8hlv:C (2.55) BS01 0IE N/A GO:0009765 ... N/A 37633266
    44 8hlv:C (2.55) BS02 CHL N/A GO:0009765 ... N/A 37633266
    45 8hlv:C (2.55) BS03 CHL N/A GO:0009765 ... N/A 37633266
    46 8hlv:C (2.55) BS04 0UR N/A GO:0009765 ... N/A 37633266
    47 8hlv:C (2.55) BS05 0IE N/A GO:0009765 ... N/A 37633266
    48 8hlv:C (2.55) BS06 0IE N/A GO:0009765 ... N/A 37633266
    49 8hlv:C (2.55) BS07 CHL N/A GO:0009765 ... N/A 37633266
    50 8hlv:C (2.55) BS08 CHL N/A GO:0009765 ... N/A 37633266
    51 8hlv:C (2.55) BS09 CLA N/A GO:0009765 ... N/A 37633266
    52 8hlv:C (2.55) BS10 CLA N/A GO:0009765 ... N/A 37633266
    53 8hlv:C (2.55) BS11 CHL N/A GO:0009765 ... N/A 37633266
    54 8hlv:C (2.55) BS12 CHL N/A GO:0009765 ... N/A 37633266
    55 8hlv:C (2.55) BS13 CHL N/A GO:0009765 ... N/A 37633266
    56 8hlv:C (2.55) BS14 CHL N/A GO:0009765 ... N/A 37633266
    57 8hlv:C (2.55) BS15 CHL N/A GO:0009765 ... N/A 37633266
    58 8hlv:C (2.55) BS16 CLA N/A GO:0009765 ... N/A 37633266
    59 8hlv:C (2.55) BS17 CLA N/A GO:0009765 ... N/A 37633266
    60 8hlv:C (2.55) BS18 CLA N/A GO:0009765 ... N/A 37633266
    61 8hlv:C (2.55) BS19 CLA N/A GO:0009765 ... N/A 37633266
    62 8hlv:C (2.55) BS20 CHL N/A GO:0009765 ... N/A 37633266
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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