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BioLiP
Download all results in tab-seperated text for 112 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8aks:0 (3.9) BS01 ADP ? N/A P74717 39152237
    2 8aks:0 (3.9) BS02 ADP ? N/A P74717 39152237
    3 8aks:1 (3.9) BS01 ADP ? N/A P74717 39152237
    4 8aks:1 (3.9) BS02 ADP ? N/A P74717 39152237
    5 8aks:2 (3.9) BS01 ADP ? N/A P74717 39152237
    6 8aks:2 (3.9) BS02 ADP ? N/A P74717 39152237
    7 8aks:3 (3.9) BS01 ADP ? N/A P74717 39152237
    8 8aks:3 (3.9) BS02 ADP ? N/A P74717 39152237
    9 8aks:4 (3.9) BS01 ADP ? N/A P74717 39152237
    10 8aks:4 (3.9) BS02 ADP ? N/A P74717 39152237
    11 8aks:5 (3.9) BS01 ADP ? N/A P74717 39152237
    12 8aks:5 (3.9) BS02 ADP ? N/A P74717 39152237
    13 8aks:6 (3.9) BS01 ADP ? N/A P74717 39152237
    14 8aks:6 (3.9) BS02 ADP ? N/A P74717 39152237
    15 8aks:7 (3.9) BS01 ADP ? N/A P74717 39152237
    16 8aks:7 (3.9) BS02 ADP ? N/A P74717 39152237
    17 8aks:A (3.9) BS01 ADP ? N/A P74717 39152237
    18 8aks:B (3.9) BS01 ADP ? N/A P74717 39152237
    19 8aks:C (3.9) BS01 ADP ? N/A P74717 39152237
    20 8aks:D (3.9) BS01 ADP ? N/A P74717 39152237
    21 8aks:E (3.9) BS01 ADP ? N/A P74717 39152237
    22 8aks:F (3.9) BS01 ADP ? N/A P74717 39152237
    23 8aks:G (3.9) BS01 ADP ? N/A P74717 39152237
    24 8aks:H (3.9) BS01 ADP ? N/A P74717 39152237
    25 8aks:H (3.9) BS02 ADP ? N/A P74717 39152237
    26 8aks:I (3.9) BS01 ADP ? N/A P74717 39152237
    27 8aks:I (3.9) BS02 ADP ? N/A P74717 39152237
    28 8aks:J (3.9) BS01 ADP ? N/A P74717 39152237
    29 8aks:J (3.9) BS02 ADP ? N/A P74717 39152237
    30 8aks:K (3.9) BS01 ADP ? N/A P74717 39152237
    31 8aks:K (3.9) BS02 ADP ? N/A P74717 39152237
    32 8aks:L (3.9) BS01 ADP ? N/A P74717 39152237
    33 8aks:L (3.9) BS02 ADP ? N/A P74717 39152237
    34 8aks:M (3.9) BS01 ADP ? N/A P74717 39152237
    35 8aks:M (3.9) BS02 ADP ? N/A P74717 39152237
    36 8aks:N (3.9) BS01 ADP ? N/A P74717 39152237
    37 8aks:N (3.9) BS02 ADP ? N/A P74717 39152237
    38 8aks:O (3.9) BS01 ADP ? N/A P74717 39152237
    39 8aks:O (3.9) BS02 ADP ? N/A P74717 39152237
    40 8aks:P (3.9) BS01 ADP ? N/A P74717 39152237
    41 8aks:P (3.9) BS02 ADP ? N/A P74717 39152237
    42 8aks:Q (3.9) BS01 ADP ? N/A P74717 39152237
    43 8aks:Q (3.9) BS02 ADP ? N/A P74717 39152237
    44 8aks:R (3.9) BS01 ADP ? N/A P74717 39152237
    45 8aks:R (3.9) BS02 ADP ? N/A P74717 39152237
    46 8aks:S (3.9) BS01 ADP ? N/A P74717 39152237
    47 8aks:S (3.9) BS02 ADP ? N/A P74717 39152237
    48 8aks:T (3.9) BS01 ADP ? N/A P74717 39152237
    49 8aks:T (3.9) BS02 ADP ? N/A P74717 39152237
    50 8aks:U (3.9) BS01 ADP ? N/A P74717 39152237
    51 8aks:U (3.9) BS02 ADP ? N/A P74717 39152237
    52 8aks:V (3.9) BS01 ADP ? N/A P74717 39152237
    53 8aks:V (3.9) BS02 ADP ? N/A P74717 39152237
    54 8aks:W (3.9) BS01 ADP ? N/A P74717 39152237
    55 8aks:W (3.9) BS02 ADP ? N/A P74717 39152237
    56 8aks:X (3.9) BS01 ADP ? N/A P74717 39152237
    57 8aks:X (3.9) BS02 ADP ? N/A P74717 39152237
    58 8aks:Y (3.9) BS01 ADP ? N/A P74717 39152237
    59 8aks:Y (3.9) BS02 ADP ? N/A P74717 39152237
    60 8aks:Z (3.9) BS01 ADP ? N/A P74717 39152237
    61 8aks:Z (3.9) BS02 ADP ? N/A P74717 39152237
    62 8aks:a (3.9) BS01 ADP ? N/A P74717 39152237
    63 8aks:a (3.9) BS02 ADP ? N/A P74717 39152237
    64 8aks:b (3.9) BS01 ADP ? N/A P74717 39152237
    65 8aks:b (3.9) BS02 ADP ? N/A P74717 39152237
    66 8aks:c (3.9) BS01 ADP ? N/A P74717 39152237
    67 8aks:c (3.9) BS02 ADP ? N/A P74717 39152237
    68 8aks:d (3.9) BS01 ADP ? N/A P74717 39152237
    69 8aks:d (3.9) BS02 ADP ? N/A P74717 39152237
    70 8aks:e (3.9) BS01 ADP ? N/A P74717 39152237
    71 8aks:e (3.9) BS02 ADP ? N/A P74717 39152237
    72 8aks:f (3.9) BS01 ADP ? N/A P74717 39152237
    73 8aks:f (3.9) BS02 ADP ? N/A P74717 39152237
    74 8aks:g (3.9) BS01 ADP ? N/A P74717 39152237
    75 8aks:g (3.9) BS02 ADP ? N/A P74717 39152237
    76 8aks:h (3.9) BS01 ADP ? N/A P74717 39152237
    77 8aks:h (3.9) BS02 ADP ? N/A P74717 39152237
    78 8aks:i (3.9) BS01 ADP ? N/A P74717 39152237
    79 8aks:i (3.9) BS02 ADP ? N/A P74717 39152237
    80 8aks:j (3.9) BS01 ADP ? N/A P74717 39152237
    81 8aks:j (3.9) BS02 ADP ? N/A P74717 39152237
    82 8aks:k (3.9) BS01 ADP ? N/A P74717 39152237
    83 8aks:k (3.9) BS02 ADP ? N/A P74717 39152237
    84 8aks:l (3.9) BS01 ADP ? N/A P74717 39152237
    85 8aks:l (3.9) BS02 ADP ? N/A P74717 39152237
    86 8aks:m (3.9) BS01 ADP ? N/A P74717 39152237
    87 8aks:m (3.9) BS02 ADP ? N/A P74717 39152237
    88 8aks:n (3.9) BS01 ADP ? N/A P74717 39152237
    89 8aks:n (3.9) BS02 ADP ? N/A P74717 39152237
    90 8aks:o (3.9) BS01 ADP ? N/A P74717 39152237
    91 8aks:o (3.9) BS02 ADP ? N/A P74717 39152237
    92 8aks:p (3.9) BS01 ADP ? N/A P74717 39152237
    93 8aks:p (3.9) BS02 ADP ? N/A P74717 39152237
    94 8aks:q (3.9) BS01 ADP ? N/A P74717 39152237
    95 8aks:q (3.9) BS02 ADP ? N/A P74717 39152237
    96 8aks:r (3.9) BS01 ADP ? N/A P74717 39152237
    97 8aks:r (3.9) BS02 ADP ? N/A P74717 39152237
    98 8aks:s (3.9) BS01 ADP ? N/A P74717 39152237
    99 8aks:s (3.9) BS02 ADP ? N/A P74717 39152237
    100 8aks:t (3.9) BS01 ADP ? N/A P74717 39152237
    101 8aks:t (3.9) BS02 ADP ? N/A P74717 39152237
    102 8aks:u (3.9) BS01 ADP ? N/A P74717 39152237
    103 8aks:v (3.9) BS01 ADP ? N/A P74717 39152237
    104 8aks:v (3.9) BS02 ADP ? N/A P74717 39152237
    105 8aks:w (3.9) BS01 ADP ? N/A P74717 39152237
    106 8aks:w (3.9) BS02 ADP ? N/A P74717 39152237
    107 8aks:x (3.9) BS01 ADP ? N/A P74717 39152237
    108 8aks:x (3.9) BS02 ADP ? N/A P74717 39152237
    109 8aks:y (3.9) BS01 ADP ? N/A P74717 39152237
    110 8aks:y (3.9) BS02 ADP ? N/A P74717 39152237
    111 8aks:z (3.9) BS01 ADP ? N/A P74717 39152237
    112 8aks:z (3.9) BS02 ADP ? N/A P74717 39152237
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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