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BioLiP
Download all results in tab-seperated text for 48 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7tzc:A (2.45) BS01 ATP ? GO:0003151 ... P11716 35580609
    2 7tzc:A (2.45) BS02 CA ? GO:0003151 ... P11716 35580609
    3 7tzc:A (2.45) BS03 ZN ? GO:0003151 ... P11716 35580609
    4 7tzc:A (2.45) BS04 CFF ? GO:0003151 ... P11716 35580609
    5 7tzc:A (2.45) BS05 ATP ? GO:0003151 ... P11716 35580609
    6 7tzc:A (2.45) BS06 KVR ? GO:0003151 ... P11716 35580609
    7 7tzc:A (2.45) BS07 L9R ? GO:0003151 ... P11716 35580609
    8 7tzc:A (2.45) BS08 L9R ? GO:0003151 ... P11716 35580609
    9 7tzc:B (2.45) BS01 ATP ? GO:0003151 ... P11716 35580609
    10 7tzc:B (2.45) BS02 CA ? GO:0003151 ... P11716 35580609
    11 7tzc:B (2.45) BS03 ZN ? GO:0003151 ... P11716 35580609
    12 7tzc:B (2.45) BS04 CFF ? GO:0003151 ... P11716 35580609
    13 7tzc:B (2.45) BS05 ATP ? GO:0003151 ... P11716 35580609
    14 7tzc:B (2.45) BS06 KVR ? GO:0003151 ... P11716 35580609
    15 7tzc:B (2.45) BS07 L9R ? GO:0003151 ... P11716 35580609
    16 7tzc:B (2.45) BS08 L9R ? GO:0003151 ... P11716 35580609
    17 7tzc:C (2.45) BS01 CA ? GO:0000086 ... P0DP23 35580609
    18 7tzc:C (2.45) BS02 CA ? GO:0000086 ... P0DP23 35580609
    19 7tzc:C (2.45) BS03 CA ? GO:0000086 ... P0DP23 35580609
    20 7tzc:C (2.45) BS04 CA ? GO:0000086 ... P0DP23 35580609
    21 7tzc:D (2.45) BS01 CA ? GO:0000086 ... P0DP23 35580609
    22 7tzc:D (2.45) BS02 CA ? GO:0000086 ... P0DP23 35580609
    23 7tzc:D (2.45) BS03 CA ? GO:0000086 ... P0DP23 35580609
    24 7tzc:D (2.45) BS04 CA ? GO:0000086 ... P0DP23 35580609
    25 7tzc:E (2.45) BS01 CA ? GO:0000086 ... P0DP23 35580609
    26 7tzc:E (2.45) BS02 CA ? GO:0000086 ... P0DP23 35580609
    27 7tzc:E (2.45) BS03 CA ? GO:0000086 ... P0DP23 35580609
    28 7tzc:E (2.45) BS04 CA ? GO:0000086 ... P0DP23 35580609
    29 7tzc:G (2.45) BS01 L9R ? GO:0003151 ... P11716 35580609
    30 7tzc:G (2.45) BS02 ATP ? GO:0003151 ... P11716 35580609
    31 7tzc:G (2.45) BS03 CA ? GO:0003151 ... P11716 35580609
    32 7tzc:G (2.45) BS04 ZN ? GO:0003151 ... P11716 35580609
    33 7tzc:G (2.45) BS05 CFF ? GO:0003151 ... P11716 35580609
    34 7tzc:G (2.45) BS06 ATP ? GO:0003151 ... P11716 35580609
    35 7tzc:G (2.45) BS07 KVR ? GO:0003151 ... P11716 35580609
    36 7tzc:G (2.45) BS08 L9R ? GO:0003151 ... P11716 35580609
    37 7tzc:I (2.45) BS01 L9R ? GO:0003151 ... P11716 35580609
    38 7tzc:I (2.45) BS02 ATP ? GO:0003151 ... P11716 35580609
    39 7tzc:I (2.45) BS03 CA ? GO:0003151 ... P11716 35580609
    40 7tzc:I (2.45) BS04 ZN ? GO:0003151 ... P11716 35580609
    41 7tzc:I (2.45) BS05 CFF ? GO:0003151 ... P11716 35580609
    42 7tzc:I (2.45) BS06 ATP ? GO:0003151 ... P11716 35580609
    43 7tzc:I (2.45) BS07 KVR ? GO:0003151 ... P11716 35580609
    44 7tzc:I (2.45) BS08 L9R ? GO:0003151 ... P11716 35580609
    45 7tzc:K (2.45) BS01 CA ? GO:0000086 ... P0DP23 35580609
    46 7tzc:K (2.45) BS02 CA ? GO:0000086 ... P0DP23 35580609
    47 7tzc:K (2.45) BS03 CA ? GO:0000086 ... P0DP23 35580609
    48 7tzc:K (2.45) BS04 CA ? GO:0000086 ... P0DP23 35580609
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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