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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7tba:A (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    2 7tba:A (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    3 7tba:A (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    4 7tba:B (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    5 7tba:B (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    6 7tba:B (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    7 7tba:C (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    8 7tba:C (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    9 7tba:C (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    10 7tba:D (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    11 7tba:D (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    12 7tba:D (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    13 7tba:E (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    14 7tba:E (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    15 7tba:E (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    16 7tba:F (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    17 7tba:F (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    18 7tba:F (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    19 7tba:G (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    20 7tba:G (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    21 7tba:G (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    22 7tba:H (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    23 7tba:H (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    24 7tba:H (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    25 7tba:I (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    26 7tba:I (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    27 7tba:I (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    28 7tba:J (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    29 7tba:J (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    30 7tba:J (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    31 7tba:K (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    32 7tba:K (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    33 7tba:K (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    34 7tba:L (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    35 7tba:L (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    36 7tba:L (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    37 7tba:M (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    38 7tba:M (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    39 7tba:M (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    40 7tba:N (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    41 7tba:N (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    42 7tba:N (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    43 7tba:O (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    44 7tba:O (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    45 7tba:O (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    46 7tba:P (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    47 7tba:P (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    48 7tba:P (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    49 7tba:Q (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    50 7tba:Q (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    51 7tba:Q (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    52 7tba:R (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    53 7tba:R (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    54 7tba:R (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    55 7tba:S (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    56 7tba:S (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    57 7tba:S (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    58 7tba:T (3.5) BS01 XQY ? GO:0001849 ... P02741 36468184
    59 7tba:T (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    60 7tba:T (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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