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BioLiP
Download all results in tab-seperated text for 120 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7rl1:1 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    2 7rl1:1 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    3 7rl1:2 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    4 7rl1:2 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    5 7rl1:3 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    6 7rl1:3 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    7 7rl1:4 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    8 7rl1:4 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    9 7rl1:5 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    10 7rl1:5 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    11 7rl1:6 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    12 7rl1:6 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    13 7rl1:7 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    14 7rl1:7 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    15 7rl1:8 (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    16 7rl1:8 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    17 7rl1:A (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    18 7rl1:A (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    19 7rl1:B (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    20 7rl1:B (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    21 7rl1:C (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    22 7rl1:C (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    23 7rl1:D (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    24 7rl1:D (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    25 7rl1:E (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    26 7rl1:E (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    27 7rl1:F (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    28 7rl1:F (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    29 7rl1:G (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    30 7rl1:G (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    31 7rl1:H (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    32 7rl1:H (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    33 7rl1:I (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    34 7rl1:I (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    35 7rl1:J (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    36 7rl1:J (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    37 7rl1:K (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    38 7rl1:K (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    39 7rl1:L (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    40 7rl1:L (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    41 7rl1:M (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    42 7rl1:M (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    43 7rl1:N (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    44 7rl1:N (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    45 7rl1:O (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    46 7rl1:O (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    47 7rl1:P (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    48 7rl1:P (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    49 7rl1:Q (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    50 7rl1:Q (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    51 7rl1:R (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    52 7rl1:R (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    53 7rl1:S (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    54 7rl1:S (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    55 7rl1:T (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    56 7rl1:T (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    57 7rl1:U (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    58 7rl1:U (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    59 7rl1:V (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    60 7rl1:V (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    61 7rl1:W (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    62 7rl1:W (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    63 7rl1:X (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    64 7rl1:X (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    65 7rl1:Y (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    66 7rl1:Y (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    67 7rl1:Z (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    68 7rl1:Z (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    69 7rl1:a (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    70 7rl1:a (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    71 7rl1:b (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    72 7rl1:b (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    73 7rl1:c (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    74 7rl1:c (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    75 7rl1:d (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    76 7rl1:d (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    77 7rl1:e (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    78 7rl1:e (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    79 7rl1:f (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    80 7rl1:f (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    81 7rl1:g (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    82 7rl1:g (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    83 7rl1:h (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    84 7rl1:h (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    85 7rl1:i (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    86 7rl1:i (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    87 7rl1:j (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    88 7rl1:j (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    89 7rl1:k (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    90 7rl1:k (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    91 7rl1:l (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    92 7rl1:l (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    93 7rl1:m (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    94 7rl1:m (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    95 7rl1:n (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    96 7rl1:n (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    97 7rl1:o (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    98 7rl1:o (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    99 7rl1:p (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    100 7rl1:p (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    101 7rl1:q (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    102 7rl1:q (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    103 7rl1:r (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    104 7rl1:r (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    105 7rl1:s (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    106 7rl1:s (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    107 7rl1:t (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    108 7rl1:t (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    109 7rl1:u (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    110 7rl1:u (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    111 7rl1:v (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    112 7rl1:v (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    113 7rl1:w (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    114 7rl1:w (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    115 7rl1:x (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    116 7rl1:x (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    117 7rl1:y (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    118 7rl1:y (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    119 7rl1:z (2.71) BS01 DC ? GO:0005198 ... Q6JC62 34549984
    120 7rl1:z (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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