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BioLiP
Download all results in tab-seperated text for 58 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7qho:A (3.1) BS01 peptide ? GO:0005886 ... Q79VE8 35087070
    2 7qho:A (3.1) BS02 FES ? GO:0005886 ... Q79VE8 35087070
    3 7qho:A (3.1) BS03 IZL ? GO:0005886 ... Q79VE8 35087070
    4 7qho:A (3.1) BS04 9YF ? GO:0005886 ... Q79VE8 35087070
    5 7qho:A (3.1) BS05 MQ9 ? GO:0005886 ... Q79VE8 35087070
    6 7qho:A (3.1) BS06 9YF ? GO:0005886 ... Q79VE8 35087070
    7 7qho:B (3.1) BS01 IZL 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    8 7qho:B (3.1) BS02 MQ9 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    9 7qho:B (3.1) BS03 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    10 7qho:B (3.1) BS04 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    11 7qho:B (3.1) BS05 LYC 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12 7qho:B (3.1) BS06 9YF 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    13 7qho:B (3.1) BS07 MQ9 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    14 7qho:B (3.1) BS08 9YF 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    15 7qho:C (3.1) BS01 HEC 7.1.1.8 GO:0005506 ... Q8NNK5 35087070
    16 7qho:C (3.1) BS02 HEC 7.1.1.8 GO:0005506 ... Q8NNK5 35087070
    17 7qho:D (3.1) BS01 HAS 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    18 7qho:D (3.1) BS02 HAS 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    19 7qho:D (3.1) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    20 7qho:D (3.1) BS04 CA 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    21 7qho:D (3.1) BS05 IX7 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    22 7qho:E (3.1) BS01 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    23 7qho:E (3.1) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    24 7qho:H (3.1) BS01 peptide ? N/A Q8NMB4 35087070
    25 7qho:H (3.1) BS02 9YF ? N/A Q8NMB4 35087070
    26 7qho:H (3.1) BS03 HEC ? N/A Q8NMB4 35087070
    27 7qho:I (3.1) BS01 LYC ? GO:0005886 ... Q8NP09 35087070
    28 7qho:I (3.1) BS02 9YF ? GO:0005886 ... Q8NP09 35087070
    29 7qho:I (3.1) BS03 IX7 ? GO:0005886 ... Q8NP09 35087070
    30 7qho:N (3.1) BS01 peptide ? GO:0005886 ... Q79VE8 35087070
    31 7qho:N (3.1) BS02 9YF ? GO:0005886 ... Q79VE8 35087070
    32 7qho:N (3.1) BS03 MQ9 ? GO:0005886 ... Q79VE8 35087070
    33 7qho:N (3.1) BS04 FES ? GO:0005886 ... Q79VE8 35087070
    34 7qho:N (3.1) BS05 IZL ? GO:0005886 ... Q79VE8 35087070
    35 7qho:N (3.1) BS06 9YF ? GO:0005886 ... Q79VE8 35087070
    36 7qho:O (3.1) BS01 9YF 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    37 7qho:O (3.1) BS02 MQ9 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    38 7qho:O (3.1) BS03 IZL 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    39 7qho:O (3.1) BS04 MQ9 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    40 7qho:O (3.1) BS05 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    41 7qho:O (3.1) BS06 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    42 7qho:O (3.1) BS07 LYC 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    43 7qho:O (3.1) BS08 9YF 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    44 7qho:P (3.1) BS01 HEC 7.1.1.8 GO:0005506 ... Q8NNK5 35087070
    45 7qho:P (3.1) BS02 HEC 7.1.1.8 GO:0005506 ... Q8NNK5 35087070
    46 7qho:Q (3.1) BS01 HAS 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    47 7qho:Q (3.1) BS02 HAS 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    48 7qho:Q (3.1) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    49 7qho:Q (3.1) BS04 CA 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    50 7qho:Q (3.1) BS05 IX7 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    51 7qho:R (3.1) BS01 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    52 7qho:R (3.1) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    53 7qho:U (3.1) BS01 peptide ? N/A Q8NMB4 35087070
    54 7qho:U (3.1) BS02 HEC ? N/A Q8NMB4 35087070
    55 7qho:U (3.1) BS03 9YF ? N/A Q8NMB4 35087070
    56 7qho:V (3.1) BS01 LYC ? GO:0005886 ... Q8NP09 35087070
    57 7qho:V (3.1) BS02 IX7 ? GO:0005886 ... Q8NP09 35087070
    58 7qho:V (3.1) BS03 9YF ? GO:0005886 ... Q8NP09 35087070
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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