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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 285 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7pi5:A (2.78) BS01 OEX 1.10.3.9 GO:0005506 ... D0FY08 36799903
    2 7pi5:A (2.78) BS02 FE2 1.10.3.9 GO:0005506 ... D0FY08 36799903
    3 7pi5:A (2.78) BS03 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    4 7pi5:A (2.78) BS04 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    5 7pi5:A (2.78) BS05 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    6 7pi5:A (2.78) BS06 PHO 1.10.3.9 GO:0005506 ... D0FY08 36799903
    7 7pi5:A (2.78) BS07 PHO 1.10.3.9 GO:0005506 ... D0FY08 36799903
    8 7pi5:A (2.78) BS08 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    9 7pi5:A (2.78) BS09 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    10 7pi5:B (2.78) BS01 peptide ? GO:0009507 ... D0FY05 36799903
    11 7pi5:B (2.78) BS02 CLA ? GO:0009507 ... D0FY05 36799903
    12 7pi5:B (2.78) BS03 CLA ? GO:0009507 ... D0FY05 36799903
    13 7pi5:B (2.78) BS04 CLA ? GO:0009507 ... D0FY05 36799903
    14 7pi5:B (2.78) BS05 CLA ? GO:0009507 ... D0FY05 36799903
    15 7pi5:B (2.78) BS06 CLA ? GO:0009507 ... D0FY05 36799903
    16 7pi5:B (2.78) BS07 CLA ? GO:0009507 ... D0FY05 36799903
    17 7pi5:B (2.78) BS08 CLA ? GO:0009507 ... D0FY05 36799903
    18 7pi5:B (2.78) BS09 CLA ? GO:0009507 ... D0FY05 36799903
    19 7pi5:B (2.78) BS10 CLA ? GO:0009507 ... D0FY05 36799903
    20 7pi5:B (2.78) BS11 CLA ? GO:0009507 ... D0FY05 36799903
    21 7pi5:B (2.78) BS12 CLA ? GO:0009507 ... D0FY05 36799903
    22 7pi5:B (2.78) BS13 CLA ? GO:0009507 ... D0FY05 36799903
    23 7pi5:B (2.78) BS14 CLA ? GO:0009507 ... D0FY05 36799903
    24 7pi5:B (2.78) BS15 CLA ? GO:0009507 ... D0FY05 36799903
    25 7pi5:B (2.78) BS16 CLA ? GO:0009507 ... D0FY05 36799903
    26 7pi5:B (2.78) BS17 CLA ? GO:0009507 ... D0FY05 36799903
    27 7pi5:B (2.78) BS18 C7Z ? GO:0009507 ... D0FY05 36799903
    28 7pi5:C (2.78) BS01 OEX ? GO:0005737 ... D0FXY3 36799903
    29 7pi5:C (2.78) BS02 CLA ? GO:0005737 ... D0FXY3 36799903
    30 7pi5:C (2.78) BS03 CLA ? GO:0005737 ... D0FXY3 36799903
    31 7pi5:C (2.78) BS04 CLA ? GO:0005737 ... D0FXY3 36799903
    32 7pi5:C (2.78) BS05 CLA ? GO:0005737 ... D0FXY3 36799903
    33 7pi5:C (2.78) BS06 CLA ? GO:0005737 ... D0FXY3 36799903
    34 7pi5:C (2.78) BS07 CLA ? GO:0005737 ... D0FXY3 36799903
    35 7pi5:C (2.78) BS08 CLA ? GO:0005737 ... D0FXY3 36799903
    36 7pi5:C (2.78) BS09 CLA ? GO:0005737 ... D0FXY3 36799903
    37 7pi5:C (2.78) BS10 CLA ? GO:0005737 ... D0FXY3 36799903
    38 7pi5:C (2.78) BS11 CLA ? GO:0005737 ... D0FXY3 36799903
    39 7pi5:C (2.78) BS12 CLA ? GO:0005737 ... D0FXY3 36799903
    40 7pi5:C (2.78) BS13 CLA ? GO:0005737 ... D0FXY3 36799903
    41 7pi5:C (2.78) BS14 CLA ? GO:0005737 ... D0FXY3 36799903
    42 7pi5:C (2.78) BS15 LMK ? GO:0005737 ... D0FXY3 36799903
    43 7pi5:D (2.78) BS01 peptide 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    44 7pi5:D (2.78) BS02 FE2 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    45 7pi5:D (2.78) BS03 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    46 7pi5:D (2.78) BS04 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    47 7pi5:D (2.78) BS05 PHO 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    48 7pi5:D (2.78) BS06 PHO 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    49 7pi5:D (2.78) BS07 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    50 7pi5:D (2.78) BS08 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    51 7pi5:D (2.78) BS09 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    52 7pi5:E (2.78) BS01 peptide ? GO:0005506 ... D0FY01 36799903
    53 7pi5:E (2.78) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    54 7pi5:F (2.78) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    55 7pi5:G (2.78) BS01 CHL ? GO:0009765 ... A1XKU7 36799903
    56 7pi5:G (2.78) BS02 CLA ? GO:0009765 ... A1XKU7 36799903
    57 7pi5:G (2.78) BS03 CLA ? GO:0009765 ... A1XKU7 36799903
    58 7pi5:G (2.78) BS04 CLA ? GO:0009765 ... A1XKU7 36799903
    59 7pi5:G (2.78) BS05 CHL ? GO:0009765 ... A1XKU7 36799903
    60 7pi5:G (2.78) BS06 CHL ? GO:0009765 ... A1XKU7 36799903
    61 7pi5:G (2.78) BS07 CHL ? GO:0009765 ... A1XKU7 36799903
    62 7pi5:G (2.78) BS08 CHL ? GO:0009765 ... A1XKU7 36799903
    63 7pi5:G (2.78) BS09 CHL ? GO:0009765 ... A1XKU7 36799903
    64 7pi5:G (2.78) BS10 CLA ? GO:0009765 ... A1XKU7 36799903
    65 7pi5:G (2.78) BS11 CLA ? GO:0009765 ... A1XKU7 36799903
    66 7pi5:G (2.78) BS12 CLA ? GO:0009765 ... A1XKU7 36799903
    67 7pi5:G (2.78) BS13 CLA ? GO:0009765 ... A1XKU7 36799903
    68 7pi5:G (2.78) BS14 CHL ? GO:0009765 ... A1XKU7 36799903
    69 7pi5:H (2.78) BS01 CLA ? GO:0009523 ... A0A1C8XRP3 36799903
    70 7pi5:H (2.78) BS02 CLA ? GO:0009523 ... A0A1C8XRP3 36799903
    71 7pi5:H (2.78) BS03 CLA ? GO:0009523 ... A0A1C8XRP3 36799903
    72 7pi5:H (2.78) BS04 CLA ? GO:0009523 ... A0A1C8XRP3 36799903
    73 7pi5:H (2.78) BS05 CLA ? GO:0009523 ... A0A1C8XRP3 36799903
    74 7pi5:H (2.78) BS06 RRX ? GO:0009523 ... A0A1C8XRP3 36799903
    75 7pi5:I (2.78) BS01 CLA ? GO:0005737 ... D0FXX5 36799903
    76 7pi5:I (2.78) BS02 CLA ? GO:0005737 ... D0FXX5 36799903
    77 7pi5:K (2.78) BS01 CLA ? GO:0009523 ... D0FXX2 36799903
    78 7pi5:K (2.78) BS02 CLA ? GO:0009523 ... D0FXX2 36799903
    79 7pi5:M (2.78) BS01 CLA ? GO:0009523 ... D0FXZ3 36799903
    80 7pi5:N (2.78) BS01 CHL N/A GO:0009765 ... N/A 36799903
    81 7pi5:N (2.78) BS02 CLA N/A GO:0009765 ... N/A 36799903
    82 7pi5:N (2.78) BS03 CLA N/A GO:0009765 ... N/A 36799903
    83 7pi5:N (2.78) BS04 CLA N/A GO:0009765 ... N/A 36799903
    84 7pi5:N (2.78) BS05 CHL N/A GO:0009765 ... N/A 36799903
    85 7pi5:N (2.78) BS06 CHL N/A GO:0009765 ... N/A 36799903
    86 7pi5:N (2.78) BS07 CHL N/A GO:0009765 ... N/A 36799903
    87 7pi5:N (2.78) BS08 CHL N/A GO:0009765 ... N/A 36799903
    88 7pi5:N (2.78) BS09 CHL N/A GO:0009765 ... N/A 36799903
    89 7pi5:N (2.78) BS10 CLA N/A GO:0009765 ... N/A 36799903
    90 7pi5:N (2.78) BS11 CLA N/A GO:0009765 ... N/A 36799903
    91 7pi5:N (2.78) BS12 CLA N/A GO:0009765 ... N/A 36799903
    92 7pi5:N (2.78) BS13 CLA N/A GO:0009765 ... N/A 36799903
    93 7pi5:N (2.78) BS14 CLA N/A GO:0009765 ... N/A 36799903
    94 7pi5:N (2.78) BS15 CHL N/A GO:0009765 ... N/A 36799903
    95 7pi5:R (2.78) BS01 C7Z N/A GO:0009765 ... N/A 36799903
    96 7pi5:R (2.78) BS02 CLA N/A GO:0009765 ... N/A 36799903
    97 7pi5:R (2.78) BS03 CLA N/A GO:0009765 ... N/A 36799903
    98 7pi5:R (2.78) BS04 CLA N/A GO:0009765 ... N/A 36799903
    99 7pi5:R (2.78) BS05 CHL N/A GO:0009765 ... N/A 36799903
    100 7pi5:R (2.78) BS06 CHL N/A GO:0009765 ... N/A 36799903
    101 7pi5:R (2.78) BS07 CLA N/A GO:0009765 ... N/A 36799903
    102 7pi5:R (2.78) BS08 CLA N/A GO:0009765 ... N/A 36799903
    103 7pi5:R (2.78) BS09 CLA N/A GO:0009765 ... N/A 36799903
    104 7pi5:R (2.78) BS10 CLA N/A GO:0009765 ... N/A 36799903
    105 7pi5:R (2.78) BS11 CLA N/A GO:0009765 ... N/A 36799903
    106 7pi5:R (2.78) BS12 CHL N/A GO:0009765 ... N/A 36799903
    107 7pi5:S (2.78) BS01 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    108 7pi5:S (2.78) BS02 LMK ? GO:0009765 ... A0A7S3VRZ8 36799903
    109 7pi5:S (2.78) BS03 CHL ? GO:0009765 ... A0A7S3VRZ8 36799903
    110 7pi5:S (2.78) BS04 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    111 7pi5:S (2.78) BS05 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    112 7pi5:S (2.78) BS06 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    113 7pi5:S (2.78) BS07 CHL ? GO:0009765 ... A0A7S3VRZ8 36799903
    114 7pi5:S (2.78) BS08 CHL ? GO:0009765 ... A0A7S3VRZ8 36799903
    115 7pi5:S (2.78) BS09 CHL ? GO:0009765 ... A0A7S3VRZ8 36799903
    116 7pi5:S (2.78) BS10 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    117 7pi5:S (2.78) BS11 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    118 7pi5:S (2.78) BS12 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    119 7pi5:S (2.78) BS13 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    120 7pi5:S (2.78) BS14 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    121 7pi5:S (2.78) BS15 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    122 7pi5:S (2.78) BS16 CLA ? GO:0009765 ... A0A7S3VRZ8 36799903
    123 7pi5:X (2.78) BS01 CLA ? GO:0009523 ... A0A7S3VKF3 36799903
    124 7pi5:X (2.78) BS02 RRX ? GO:0009523 ... A0A7S3VKF3 36799903
    125 7pi5:Y (2.78) BS01 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    126 7pi5:Y (2.78) BS02 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    127 7pi5:Y (2.78) BS03 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    128 7pi5:Y (2.78) BS04 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    129 7pi5:Y (2.78) BS05 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    130 7pi5:Y (2.78) BS06 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    131 7pi5:Y (2.78) BS07 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    132 7pi5:Y (2.78) BS08 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    133 7pi5:Y (2.78) BS09 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    134 7pi5:Y (2.78) BS10 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    135 7pi5:Y (2.78) BS11 CHL ? GO:0009765 ... A0A6S8N9J6 36799903
    136 7pi5:Y (2.78) BS12 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    137 7pi5:Y (2.78) BS13 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    138 7pi5:Y (2.78) BS14 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    139 7pi5:Y (2.78) BS15 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    140 7pi5:Y (2.78) BS16 CLA ? GO:0009765 ... A0A6S8N9J6 36799903
    141 7pi5:Z (2.78) BS01 CLA ? GO:0009523 ... D0FXZ2 36799903
    142 7pi5:a (2.78) BS01 OEX 1.10.3.9 GO:0005506 ... D0FY08 36799903
    143 7pi5:a (2.78) BS02 FE2 1.10.3.9 GO:0005506 ... D0FY08 36799903
    144 7pi5:a (2.78) BS03 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    145 7pi5:a (2.78) BS04 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    146 7pi5:a (2.78) BS05 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    147 7pi5:a (2.78) BS06 PHO 1.10.3.9 GO:0005506 ... D0FY08 36799903
    148 7pi5:a (2.78) BS07 PHO 1.10.3.9 GO:0005506 ... D0FY08 36799903
    149 7pi5:a (2.78) BS08 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    150 7pi5:a (2.78) BS09 CLA 1.10.3.9 GO:0005506 ... D0FY08 36799903
    151 7pi5:b (2.78) BS01 peptide ? GO:0009507 ... D0FY05 36799903
    152 7pi5:b (2.78) BS02 CLA ? GO:0009507 ... D0FY05 36799903
    153 7pi5:b (2.78) BS03 CLA ? GO:0009507 ... D0FY05 36799903
    154 7pi5:b (2.78) BS04 CLA ? GO:0009507 ... D0FY05 36799903
    155 7pi5:b (2.78) BS05 CLA ? GO:0009507 ... D0FY05 36799903
    156 7pi5:b (2.78) BS06 CLA ? GO:0009507 ... D0FY05 36799903
    157 7pi5:b (2.78) BS07 CLA ? GO:0009507 ... D0FY05 36799903
    158 7pi5:b (2.78) BS08 CLA ? GO:0009507 ... D0FY05 36799903
    159 7pi5:b (2.78) BS09 CLA ? GO:0009507 ... D0FY05 36799903
    160 7pi5:b (2.78) BS10 CLA ? GO:0009507 ... D0FY05 36799903
    161 7pi5:b (2.78) BS11 CLA ? GO:0009507 ... D0FY05 36799903
    162 7pi5:b (2.78) BS12 CLA ? GO:0009507 ... D0FY05 36799903
    163 7pi5:b (2.78) BS13 CLA ? GO:0009507 ... D0FY05 36799903
    164 7pi5:b (2.78) BS14 CLA ? GO:0009507 ... D0FY05 36799903
    165 7pi5:b (2.78) BS15 CLA ? GO:0009507 ... D0FY05 36799903
    166 7pi5:b (2.78) BS16 CLA ? GO:0009507 ... D0FY05 36799903
    167 7pi5:b (2.78) BS17 CLA ? GO:0009507 ... D0FY05 36799903
    168 7pi5:b (2.78) BS18 C7Z ? GO:0009507 ... D0FY05 36799903
    169 7pi5:c (2.78) BS01 OEX ? GO:0005737 ... D0FXY3 36799903
    170 7pi5:c (2.78) BS02 CLA ? GO:0005737 ... D0FXY3 36799903
    171 7pi5:c (2.78) BS03 CLA ? GO:0005737 ... D0FXY3 36799903
    172 7pi5:c (2.78) BS04 CLA ? GO:0005737 ... D0FXY3 36799903
    173 7pi5:c (2.78) BS05 CLA ? GO:0005737 ... D0FXY3 36799903
    174 7pi5:c (2.78) BS06 CLA ? GO:0005737 ... D0FXY3 36799903
    175 7pi5:c (2.78) BS07 CLA ? GO:0005737 ... D0FXY3 36799903
    176 7pi5:c (2.78) BS08 CLA ? GO:0005737 ... D0FXY3 36799903
    177 7pi5:c (2.78) BS09 CLA ? GO:0005737 ... D0FXY3 36799903
    178 7pi5:c (2.78) BS10 CLA ? GO:0005737 ... D0FXY3 36799903
    179 7pi5:c (2.78) BS11 CLA ? GO:0005737 ... D0FXY3 36799903
    180 7pi5:c (2.78) BS12 CLA ? GO:0005737 ... D0FXY3 36799903
    181 7pi5:c (2.78) BS13 CLA ? GO:0005737 ... D0FXY3 36799903
    182 7pi5:c (2.78) BS14 CLA ? GO:0005737 ... D0FXY3 36799903
    183 7pi5:c (2.78) BS15 LMK ? GO:0005737 ... D0FXY3 36799903
    184 7pi5:d (2.78) BS01 peptide 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    185 7pi5:d (2.78) BS02 FE2 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    186 7pi5:d (2.78) BS03 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    187 7pi5:d (2.78) BS04 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    188 7pi5:d (2.78) BS05 PHO 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    189 7pi5:d (2.78) BS06 PHO 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    190 7pi5:d (2.78) BS07 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    191 7pi5:d (2.78) BS08 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    192 7pi5:d (2.78) BS09 CLA 1.10.3.9 GO:0005506 ... A0A1C8XRK9 36799903
    193 7pi5:e (2.78) BS01 peptide ? GO:0005506 ... D0FY01 36799903
    194 7pi5:e (2.78) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    195 7pi5:f (2.78) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    196 7pi5:g (2.78) BS01 CHL ? GO:0009765 ... A1XKU7 36799903
    197 7pi5:g (2.78) BS02 CLA ? GO:0009765 ... A1XKU7 36799903
    198 7pi5:g (2.78) BS03 CLA ? GO:0009765 ... A1XKU7 36799903
    199 7pi5:g (2.78) BS04 CLA ? GO:0009765 ... A1XKU7 36799903
    200 7pi5:g (2.78) BS05 CHL ? GO:0009765 ... A1XKU7 36799903

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218