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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7pau:0 (8.3) BS01 rna ? GO:0003735 ... P78006 36171285
    2 7pau:1 (8.3) BS01 rna ? GO:0003735 ... P75447 36171285
    3 7pau:2 (8.3) BS01 rna ? GO:0003735 ... P52864 36171285
    4 7pau:7 (8.3) BS01 rna ? GO:0005737 ... P75161 36171285
    5 7pau:a (8.3) BS01 rna ? GO:0002181 ... P75577 36171285
    6 7pau:b (8.3) BS01 rna ? GO:0003735 ... P75580 36171285
    7 7pau:c (8.3) BS01 rna ? GO:0003735 ... P75579 36171285
    8 7pau:d (8.3) BS01 rna ? GO:0000049 ... Q50306 36171285
    9 7pau:d (8.3) BS02 rna ? GO:0000049 ... Q50306 36171285
    10 7pau:e (8.3) BS01 rna ? GO:0003735 ... Q50303 36171285
    11 7pau:f (8.3) BS01 rna ? GO:0003735 ... P75540 36171285
    12 7pau:g (8.3) BS01 rna ? GO:0003735 ... P75240 36171285
    13 7pau:h (8.3) BS01 rna ? GO:0003735 ... P75550 36171285
    14 7pau:i (8.3) BS01 rna ? GO:0003729 ... P75178 36171285
    15 7pau:j (8.3) BS01 rna ? GO:0003735 ... Q50308 36171285
    16 7pau:k (8.3) BS01 rna ? GO:0003735 ... Q50300 36171285
    17 7pau:l (8.3) BS01 rna ? GO:0000049 ... P41204 36171285
    18 7pau:m (8.3) BS01 rna ? GO:0003735 ... Q59547 36171285
    19 7pau:n (8.3) BS01 rna ? GO:0003735 ... Q50302 36171285
    20 7pau:n (8.3) BS02 rna ? GO:0003735 ... Q50302 36171285
    21 7pau:o (8.3) BS01 rna ? GO:0003735 ... P75133 36171285
    22 7pau:p (8.3) BS01 rna ? GO:0000027 ... P78023 36171285
    23 7pau:q (8.3) BS01 rna ? GO:0003723 ... P78026 36171285
    24 7pau:r (8.3) BS01 rna ? GO:0003735 ... P75575 36171285
    25 7pau:s (8.3) BS01 rna ? GO:0003735 ... P75578 36171285
    26 7pau:t (8.3) BS01 rna ? GO:0003723 ... Q50307 36171285
    27 7pau:u (8.3) BS01 rna ? GO:0003735 ... P75458 36171285
    28 7pau:u (8.3) BS02 rna ? GO:0003735 ... P75458 36171285
    29 7pau:v (8.3) BS01 rna ? GO:0003735 ... P75171 36171285
    30 7pau:w (8.3) BS01 rna ? GO:0003735 ... Q50310 36171285
    31 7pau:y (8.3) BS01 rna ? GO:0003735 ... P75238 36171285
    32 7pau:z (8.3) BS01 rna ? GO:0003735 ... P78015 36171285
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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