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BioLiP
Download all results in tab-seperated text for 48 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7oj5:A (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    2 7oj5:A (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    3 7oj5:B (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    4 7oj5:B (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    5 7oj5:C (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    6 7oj5:C (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    7 7oj5:D (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    8 7oj5:D (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    9 7oj5:E (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    10 7oj5:E (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    11 7oj5:F (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    12 7oj5:F (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    13 7oj5:G (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    14 7oj5:G (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    15 7oj5:H (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    16 7oj5:H (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    17 7oj5:I (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    18 7oj5:I (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    19 7oj5:J (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    20 7oj5:J (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    21 7oj5:K (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    22 7oj5:K (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    23 7oj5:L (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    24 7oj5:L (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    25 7oj5:M (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    26 7oj5:M (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    27 7oj5:N (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    28 7oj5:N (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    29 7oj5:O (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    30 7oj5:O (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    31 7oj5:P (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    32 7oj5:P (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    33 7oj5:Q (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    34 7oj5:Q (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    35 7oj5:R (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    36 7oj5:R (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    37 7oj5:S (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    38 7oj5:S (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    39 7oj5:T (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    40 7oj5:T (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    41 7oj5:V (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    42 7oj5:V (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    43 7oj5:W (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    44 7oj5:W (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    45 7oj5:X (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    46 7oj5:X (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    47 7oj5:Y (2.4) BS01 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    48 7oj5:Y (2.4) BS02 MN 4.2.1.19 GO:0000105 ... A0A072VQG6 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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