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BioLiP
Download all results in tab-seperated text for 31 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7o6y:2 (3.4) BS01 CPL 7.1.1.2 GO:0005739 ... Q9B6C8 34767441
    2 7o6y:2 (3.4) BS02 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 34767441
    3 7o6y:2 (3.4) BS03 LMN 7.1.1.2 GO:0005739 ... Q9B6C8 34767441
    4 7o6y:2 (3.4) BS04 T7X 7.1.1.2 GO:0005739 ... Q9B6C8 34767441
    5 7o6y:3 (3.4) BS01 T7X 7.1.1.2 GO:0005739 ... Q9B6C7 34767441
    6 7o6y:5 (3.4) BS01 T7X 7.1.1.2 GO:0003954 ... Q9B6D3 34767441
    7 7o6y:A (3.4) BS01 SF4 1.6.99.3 GO:0003954 ... F2Z6F1 34767441
    8 7o6y:A (3.4) BS02 SF4 1.6.99.3 GO:0003954 ... F2Z6F1 34767441
    9 7o6y:A (3.4) BS03 FES 1.6.99.3 GO:0003954 ... F2Z6F1 34767441
    10 7o6y:B (3.4) BS01 SF4 7.1.1.2 GO:0005739 ... F2Z660 34767441
    11 7o6y:B (3.4) BS02 FMN 7.1.1.2 GO:0005739 ... F2Z660 34767441
    12 7o6y:B (3.4) BS03 NAI 7.1.1.2 GO:0005739 ... F2Z660 34767441
    13 7o6y:C (3.4) BS01 UQ9 1.6.99.3 GO:0005739 ... F2Z626 34767441
    14 7o6y:C (3.4) BS02 SF4 1.6.99.3 GO:0005739 ... F2Z626 34767441
    15 7o6y:E (3.4) BS01 T7X ? GO:0005739 ... Q6C7X4 34767441
    16 7o6y:E (3.4) BS02 NDP ? GO:0005739 ... Q6C7X4 34767441
    17 7o6y:H (3.4) BS01 FES 1.6.99.3 GO:0016491 ... F2Z6C0 34767441
    18 7o6y:I (3.4) BS01 SF4 1.6.99.3 GO:0003954 ... F2Z619 34767441
    19 7o6y:I (3.4) BS02 SF4 1.6.99.3 GO:0003954 ... F2Z619 34767441
    20 7o6y:J (3.4) BS01 LMN ? GO:0005739 ... Q6C674 34767441
    21 7o6y:J (3.4) BS02 LMN ? GO:0005739 ... Q6C674 34767441
    22 7o6y:K (3.4) BS01 SF4 1.6.99.3 GO:0008137 ... Q6C2Q1 34767441
    23 7o6y:K (3.4) BS02 T7X 1.6.99.3 GO:0008137 ... Q6C2Q1 34767441
    24 7o6y:M (3.4) BS01 ZN ? GO:0005739 ... Q6C8J9 34767441
    25 7o6y:O (3.4) BS01 ZMP ? GO:0000035 ... Q6C926 34767441
    26 7o6y:P (3.4) BS01 ZMP ? GO:0005739 ... Q6CI60 34767441
    27 7o6y:R (3.4) BS01 ZMP ? GO:0005739 ... Q6C9Z1 34767441
    28 7o6y:a (3.4) BS01 LMN ? GO:0005739 ... Q6CA88 34767441
    29 7o6y:b (3.4) BS01 CPL ? N/A A0A1D8NGI5 34767441
    30 7o6y:b (3.4) BS02 T7X ? N/A A0A1D8NGI5 34767441
    31 7o6y:j (3.4) BS01 LMN 1.6.99.3 GO:0016020 ... B5RSK9 34767441
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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