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BioLiP
Download all results in tab-seperated text for 128 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7m76:A (3.0) BS01 CL0 1.97.1.12 GO:0000287 ... P0A405 34750381
    2 7m76:A (3.0) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    3 7m76:A (3.0) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    4 7m76:A (3.0) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    5 7m76:A (3.0) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    6 7m76:A (3.0) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    7 7m76:A (3.0) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    8 7m76:A (3.0) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    9 7m76:A (3.0) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    10 7m76:A (3.0) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    11 7m76:A (3.0) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    12 7m76:A (3.0) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    13 7m76:A (3.0) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    14 7m76:A (3.0) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    15 7m76:A (3.0) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    16 7m76:A (3.0) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    17 7m76:A (3.0) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    18 7m76:A (3.0) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    19 7m76:A (3.0) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    20 7m76:A (3.0) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    21 7m76:A (3.0) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    22 7m76:A (3.0) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    23 7m76:A (3.0) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    24 7m76:A (3.0) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    25 7m76:A (3.0) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    26 7m76:A (3.0) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    27 7m76:A (3.0) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    28 7m76:A (3.0) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    29 7m76:A (3.0) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    30 7m76:A (3.0) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    31 7m76:A (3.0) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    32 7m76:A (3.0) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    33 7m76:A (3.0) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    34 7m76:A (3.0) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    35 7m76:A (3.0) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    36 7m76:A (3.0) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    37 7m76:A (3.0) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    38 7m76:A (3.0) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    39 7m76:A (3.0) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    40 7m76:A (3.0) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    41 7m76:A (3.0) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    42 7m76:A (3.0) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    43 7m76:A (3.0) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    44 7m76:A (3.0) BS44 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    45 7m76:A (3.0) BS45 PQN 1.97.1.12 GO:0000287 ... P0A405 34750381
    46 7m76:A (3.0) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    47 7m76:A (3.0) BS47 SF4 1.97.1.12 GO:0000287 ... P0A405 34750381
    48 7m76:A (3.0) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    49 7m76:A (3.0) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    50 7m76:A (3.0) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    51 7m76:A (3.0) BS51 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    52 7m76:A (3.0) BS52 CLA 1.97.1.12 GO:0000287 ... P0A405 34750381
    53 7m76:B (3.0) BS01 peptide 1.97.1.12 GO:0000287 ... P0A407 34750381
    54 7m76:B (3.0) BS02 CL0 1.97.1.12 GO:0000287 ... P0A407 34750381
    55 7m76:B (3.0) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    56 7m76:B (3.0) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    57 7m76:B (3.0) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    58 7m76:B (3.0) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    59 7m76:B (3.0) BS07 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    60 7m76:B (3.0) BS08 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    61 7m76:B (3.0) BS09 SF4 1.97.1.12 GO:0000287 ... P0A407 34750381
    62 7m76:B (3.0) BS10 CA 1.97.1.12 GO:0000287 ... P0A407 34750381
    63 7m76:B (3.0) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    64 7m76:B (3.0) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    65 7m76:B (3.0) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    66 7m76:B (3.0) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    67 7m76:B (3.0) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    68 7m76:B (3.0) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    69 7m76:B (3.0) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    70 7m76:B (3.0) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    71 7m76:B (3.0) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    72 7m76:B (3.0) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    73 7m76:B (3.0) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    74 7m76:B (3.0) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    75 7m76:B (3.0) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    76 7m76:B (3.0) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    77 7m76:B (3.0) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    78 7m76:B (3.0) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    79 7m76:B (3.0) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    80 7m76:B (3.0) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    81 7m76:B (3.0) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    82 7m76:B (3.0) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    83 7m76:B (3.0) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    84 7m76:B (3.0) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    85 7m76:B (3.0) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    86 7m76:B (3.0) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    87 7m76:B (3.0) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    88 7m76:B (3.0) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    89 7m76:B (3.0) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    90 7m76:B (3.0) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    91 7m76:B (3.0) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    92 7m76:B (3.0) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    93 7m76:B (3.0) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    94 7m76:B (3.0) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    95 7m76:B (3.0) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    96 7m76:B (3.0) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    97 7m76:B (3.0) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    98 7m76:B (3.0) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    99 7m76:B (3.0) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    100 7m76:B (3.0) BS48 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    101 7m76:B (3.0) BS49 CLA 1.97.1.12 GO:0000287 ... P0A407 34750381
    102 7m76:B (3.0) BS50 PQN 1.97.1.12 GO:0000287 ... P0A407 34750381
    103 7m76:C (3.0) BS01 SF4 1.97.1.12 GO:0009055 ... P0A415 34750381
    104 7m76:C (3.0) BS02 SF4 1.97.1.12 GO:0009055 ... P0A415 34750381
    105 7m76:F (3.0) BS01 CLA ? GO:0009522 ... P0A401 34750381
    106 7m76:F (3.0) BS02 CLA ? GO:0009522 ... P0A401 34750381
    107 7m76:F (3.0) BS03 CLA ? GO:0009522 ... P0A401 34750381
    108 7m76:I (3.0) BS01 CLA ? GO:0009522 ... P0A427 34750381
    109 7m76:I (3.0) BS02 CLA ? GO:0009522 ... P0A427 34750381
    110 7m76:I (3.0) BS03 CLA ? GO:0009522 ... P0A427 34750381
    111 7m76:J (3.0) BS01 CLA ? GO:0009522 ... P0A429 34750381
    112 7m76:J (3.0) BS02 CLA ? GO:0009522 ... P0A429 34750381
    113 7m76:J (3.0) BS03 CLA ? GO:0009522 ... P0A429 34750381
    114 7m76:J (3.0) BS04 CLA ? GO:0009522 ... P0A429 34750381
    115 7m76:K (3.0) BS01 CLA ? GO:0009522 ... P0A425 34750381
    116 7m76:K (3.0) BS02 CLA ? GO:0009522 ... P0A425 34750381
    117 7m76:K (3.0) BS03 CLA ? GO:0009522 ... P0A425 34750381
    118 7m76:L (3.0) BS01 CLA ? GO:0009522 ... Q8DGB4 34750381
    119 7m76:L (3.0) BS02 CLA ? GO:0009522 ... Q8DGB4 34750381
    120 7m76:L (3.0) BS03 CLA ? GO:0009522 ... Q8DGB4 34750381
    121 7m76:L (3.0) BS04 CLA ? GO:0009522 ... Q8DGB4 34750381
    122 7m76:L (3.0) BS05 CA ? GO:0009522 ... Q8DGB4 34750381
    123 7m76:L (3.0) BS06 CLA ? GO:0009522 ... Q8DGB4 34750381
    124 7m76:L (3.0) BS07 CLA ? GO:0009522 ... Q8DGB4 34750381
    125 7m76:L (3.0) BS08 CLA ? GO:0009522 ... Q8DGB4 34750381
    126 7m76:M (3.0) BS01 CLA ? GO:0009522 ... P0A403 34750381
    127 7m76:M (3.0) BS02 CLA ? GO:0009522 ... P0A403 34750381
    128 7m76:M (3.0) BS03 CLA ? GO:0009522 ... P0A403 34750381
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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