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BioLiP
Download all results in tab-seperated text for 27 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7lmz:A (3.06) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34262183
    2 7lmz:A (3.06) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 34262183
    3 7lmz:A (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    4 7lmz:B (3.06) BS01 peptide 3.6.4.6 GO:0000502 ... P55072 34262183
    5 7lmz:B (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    6 7lmz:B (3.06) BS03 ADP 3.6.4.6 GO:0000502 ... P55072 34262183
    7 7lmz:B (3.06) BS04 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    8 7lmz:B (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    9 7lmz:C (3.06) BS01 peptide 3.6.4.6 GO:0000502 ... P55072 34262183
    10 7lmz:C (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    11 7lmz:C (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    12 7lmz:C (3.06) BS04 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    13 7lmz:C (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    14 7lmz:D (3.06) BS01 peptide 3.6.4.6 GO:0000502 ... P55072 34262183
    15 7lmz:D (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    16 7lmz:D (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    17 7lmz:D (3.06) BS04 MG 3.6.4.6 GO:0000502 ... P55072 34262183
    18 7lmz:D (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    19 7lmz:D (3.06) BS06 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    20 7lmz:E (3.06) BS01 peptide 3.6.4.6 GO:0000502 ... P55072 34262183
    21 7lmz:E (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    22 7lmz:E (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    23 7lmz:E (3.06) BS04 MG 3.6.4.6 GO:0000502 ... P55072 34262183
    24 7lmz:F (3.06) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34262183
    25 7lmz:F (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    26 7lmz:F (3.06) BS03 ADP 3.6.4.6 GO:0000502 ... P55072 34262183
    27 7lmz:F (3.06) BS04 MG 3.6.4.6 GO:0000502 ... P55072 34262183
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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