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BioLiP
Download all results in tab-seperated text for 47 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7e0k:U (3.09) BS01 CHL ? GO:0009416 ... Q93WL4 34239095
    2 7e0k:U (3.09) BS02 CLA ? GO:0009416 ... Q93WL4 34239095
    3 7e0k:U (3.09) BS03 CLA ? GO:0009416 ... Q93WL4 34239095
    4 7e0k:U (3.09) BS04 CLA ? GO:0009416 ... Q93WL4 34239095
    5 7e0k:U (3.09) BS05 CHL ? GO:0009416 ... Q93WL4 34239095
    6 7e0k:U (3.09) BS06 CHL ? GO:0009416 ... Q93WL4 34239095
    7 7e0k:U (3.09) BS07 CHL ? GO:0009416 ... Q93WL4 34239095
    8 7e0k:U (3.09) BS08 CHL ? GO:0009416 ... Q93WL4 34239095
    9 7e0k:U (3.09) BS09 CHL ? GO:0009416 ... Q93WL4 34239095
    10 7e0k:U (3.09) BS10 CLA ? GO:0009416 ... Q93WL4 34239095
    11 7e0k:U (3.09) BS11 CLA ? GO:0009416 ... Q93WL4 34239095
    12 7e0k:U (3.09) BS12 CLA ? GO:0009416 ... Q93WL4 34239095
    13 7e0k:U (3.09) BS13 CLA ? GO:0009416 ... Q93WL4 34239095
    14 7e0k:U (3.09) BS14 CLA ? GO:0009416 ... Q93WL4 34239095
    15 7e0k:U (3.09) BS15 CHL ? GO:0009416 ... Q93WL4 34239095
    16 7e0k:U (3.09) BS16 CHL ? GO:0009416 ... Q93WL4 34239095
    17 7e0k:V (3.09) BS01 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    18 7e0k:V (3.09) BS02 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    19 7e0k:V (3.09) BS03 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    20 7e0k:V (3.09) BS04 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    21 7e0k:V (3.09) BS05 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    22 7e0k:V (3.09) BS06 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    23 7e0k:V (3.09) BS07 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    24 7e0k:V (3.09) BS08 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    25 7e0k:V (3.09) BS09 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    26 7e0k:V (3.09) BS10 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    27 7e0k:V (3.09) BS11 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    28 7e0k:V (3.09) BS12 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    29 7e0k:V (3.09) BS13 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    30 7e0k:V (3.09) BS14 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    31 7e0k:V (3.09) BS15 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    32 7e0k:W (3.09) BS01 CHL ? GO:0009416 ... Q93WE0 34239095
    33 7e0k:W (3.09) BS02 CHL ? GO:0009416 ... Q93WE0 34239095
    34 7e0k:W (3.09) BS03 CHL ? GO:0009416 ... Q93WE0 34239095
    35 7e0k:W (3.09) BS04 CLA ? GO:0009416 ... Q93WE0 34239095
    36 7e0k:W (3.09) BS05 CLA ? GO:0009416 ... Q93WE0 34239095
    37 7e0k:W (3.09) BS06 CLA ? GO:0009416 ... Q93WE0 34239095
    38 7e0k:W (3.09) BS07 CHL ? GO:0009416 ... Q93WE0 34239095
    39 7e0k:W (3.09) BS08 CHL ? GO:0009416 ... Q93WE0 34239095
    40 7e0k:W (3.09) BS09 CHL ? GO:0009416 ... Q93WE0 34239095
    41 7e0k:W (3.09) BS10 CHL ? GO:0009416 ... Q93WE0 34239095
    42 7e0k:W (3.09) BS11 CHL ? GO:0009416 ... Q93WE0 34239095
    43 7e0k:W (3.09) BS12 CLA ? GO:0009416 ... Q93WE0 34239095
    44 7e0k:W (3.09) BS13 CLA ? GO:0009416 ... Q93WE0 34239095
    45 7e0k:W (3.09) BS14 CLA ? GO:0009416 ... Q93WE0 34239095
    46 7e0k:W (3.09) BS15 CLA ? GO:0009416 ... Q93WE0 34239095
    47 7e0k:W (3.09) BS16 CLA ? GO:0009416 ... Q93WE0 34239095
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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