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BioLiP
Download all results in tab-seperated text for 49 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7cfu:A (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    2 7cfu:A (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    3 7cfu:B (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    4 7cfu:B (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    5 7cfu:C (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    6 7cfu:C (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    7 7cfu:D (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    8 7cfu:D (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    9 7cfu:E (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    10 7cfu:E (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    11 7cfu:F (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    12 7cfu:F (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    13 7cfu:G (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    14 7cfu:G (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    15 7cfu:H (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    16 7cfu:H (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    17 7cfu:I (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    18 7cfu:I (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    19 7cfu:J (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    20 7cfu:J (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    21 7cfu:K (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    22 7cfu:K (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    23 7cfu:L (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    24 7cfu:L (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    25 7cfu:M (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    26 7cfu:M (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    27 7cfu:N (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    28 7cfu:N (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    29 7cfu:O (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    30 7cfu:O (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    31 7cfu:P (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    32 7cfu:P (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    33 7cfu:Q (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    34 7cfu:Q (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    35 7cfu:R (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    36 7cfu:R (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    37 7cfu:S (2.15) BS01 ARG ? GO:0000166 ... A0A1R1S5L5 N/A
    38 7cfu:S (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    39 7cfu:S (2.15) BS03 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    40 7cfu:T (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    41 7cfu:T (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    42 7cfu:U (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    43 7cfu:U (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    44 7cfu:V (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    45 7cfu:V (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    46 7cfu:W (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    47 7cfu:W (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    48 7cfu:X (2.15) BS01 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    49 7cfu:X (2.15) BS02 FMN ? GO:0000166 ... A0A1R1S5L5 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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