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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7c8i:A (2.5) BS01 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    2 7c8i:A (2.5) BS02 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    3 7c8i:A (2.5) BS03 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    4 7c8i:A (2.5) BS04 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    5 7c8i:B (2.5) BS01 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    6 7c8i:B (2.5) BS02 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    7 7c8i:B (2.5) BS03 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    8 7c8i:B (2.5) BS04 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    9 7c8i:C (2.5) BS01 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    10 7c8i:C (2.5) BS02 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    11 7c8i:C (2.5) BS03 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    12 7c8i:C (2.5) BS04 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    13 7c8i:D (2.5) BS01 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    14 7c8i:D (2.5) BS02 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    15 7c8i:D (2.5) BS03 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    16 7c8i:D (2.5) BS04 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    17 7c8i:E (2.5) BS01 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    18 7c8i:E (2.5) BS02 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    19 7c8i:E (2.5) BS03 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    20 7c8i:E (2.5) BS04 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    21 7c8i:F (2.5) BS01 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    22 7c8i:F (2.5) BS02 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    23 7c8i:F (2.5) BS03 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    24 7c8i:F (2.5) BS04 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    25 7c8i:G (2.5) BS01 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    26 7c8i:G (2.5) BS02 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    27 7c8i:G (2.5) BS03 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    28 7c8i:G (2.5) BS04 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    29 7c8i:H (2.5) BS01 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    30 7c8i:H (2.5) BS02 PEP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    31 7c8i:H (2.5) BS03 TPP 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    32 7c8i:H (2.5) BS04 CA 4.1.2.22 GO:0000287 ... Q6R2Q7 36974963
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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