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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7ard:B (3.11) BS01 SF4 N/A GO:0008137 ... N/A 33768254
    2 7ard:D (3.11) BS01 SF4 N/A GO:0016651 ... N/A 33768254
    3 7ard:E (3.11) BS01 FES N/A GO:0016491 ... N/A 33768254
    4 7ard:F (3.11) BS01 FMN N/A GO:0008137 ... N/A 33768254
    5 7ard:F (3.11) BS02 SF4 N/A GO:0008137 ... N/A 33768254
    6 7ard:G (3.11) BS01 peptide N/A GO:0008137 ... N/A 33768254
    7 7ard:G (3.11) BS02 FES N/A GO:0008137 ... N/A 33768254
    8 7ard:G (3.11) BS03 SF4 N/A GO:0008137 ... N/A 33768254
    9 7ard:G (3.11) BS04 SF4 N/A GO:0008137 ... N/A 33768254
    10 7ard:I (3.11) BS01 peptide N/A GO:0016020 ... N/A 33768254
    11 7ard:I (3.11) BS02 SF4 N/A GO:0016020 ... N/A 33768254
    12 7ard:I (3.11) BS03 SF4 N/A GO:0016020 ... N/A 33768254
    13 7ard:P (3.11) BS01 peptide N/A N/A N/A 33768254
    14 7ard:P (3.11) BS02 NDP N/A N/A N/A 33768254
    15 7ard:Q (3.11) BS01 peptide N/A GO:0022900 ... N/A 33768254
    16 7ard:R (3.11) BS01 peptide N/A N/A N/A 33768254
    17 7ard:R (3.11) BS02 ZN N/A N/A N/A 33768254
    18 7ard:U (3.11) BS01 8Q1 N/A GO:0006633 ... N/A 33768254
    19 7ard:W (3.11) BS01 8Q1 N/A N/A N/A 33768254
    20 7ard:n (3.11) BS01 8Q1 ? GO:0005739 ... A0A024FSS5 33768254
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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