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BioLiP
Download all results in tab-seperated text for 45 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6yfm:AA (2.762) BS01 ZN N/A N/A N/A 32917600
    2 6yfm:AB (2.762) BS01 ZN N/A N/A N/A 32917600
    3 6yfm:AC (2.762) BS01 ZN N/A N/A N/A 32917600
    4 6yfm:AD (2.762) BS01 ZN N/A N/A N/A 32917600
    5 6yfm:AE (2.762) BS01 ZN N/A N/A N/A 32917600
    6 6yfm:AF (2.762) BS01 ZN N/A N/A N/A 32917600
    7 6yfm:AG (2.762) BS01 ZN N/A N/A N/A 32917600
    8 6yfm:AH (2.762) BS01 ZN N/A N/A N/A 32917600
    9 6yfm:AI (2.762) BS01 ZN N/A N/A N/A 32917600
    10 6yfm:AJ (2.762) BS01 ZN N/A N/A N/A 32917600
    11 6yfm:AK (2.762) BS01 ZN N/A N/A N/A 32917600
    12 6yfm:AL (2.762) BS01 ZN N/A N/A N/A 32917600
    13 6yfm:AM (2.762) BS01 ZN N/A N/A N/A 32917600
    14 6yfm:AN (2.762) BS01 ZN N/A N/A N/A 32917600
    15 6yfm:AO (2.762) BS01 ZN N/A N/A N/A 32917600
    16 6yfm:AP (2.762) BS01 ZN N/A N/A N/A 32917600
    17 6yfm:AQ (2.762) BS01 ZN N/A N/A N/A 32917600
    18 6yfm:AR (2.762) BS01 ZN N/A N/A N/A 32917600
    19 6yfm:AS (2.762) BS01 ZN N/A N/A N/A 32917600
    20 6yfm:AT (2.762) BS01 ZN N/A N/A N/A 32917600
    21 6yfm:AU (2.762) BS01 ZN N/A N/A N/A 32917600
    22 6yfm:AV (2.762) BS01 ZN N/A N/A N/A 32917600
    23 6yfm:AW (2.762) BS01 ZN N/A N/A N/A 32917600
    24 6yfm:AX (2.762) BS01 ZN N/A N/A N/A 32917600
    25 6yfm:AY (2.762) BS01 ZN N/A N/A N/A 32917600
    26 6yfm:AZ (2.762) BS01 ZN N/A N/A N/A 32917600
    27 6yfm:BA (2.762) BS01 ZN N/A N/A N/A 32917600
    28 6yfm:BB (2.762) BS01 ZN N/A N/A N/A 32917600
    29 6yfm:BC (2.762) BS01 ZN N/A N/A N/A 32917600
    30 6yfm:BD (2.762) BS01 ZN N/A N/A N/A 32917600
    31 6yfm:BE (2.762) BS01 ZN N/A N/A N/A 32917600
    32 6yfm:BF (2.762) BS01 ZN N/A N/A N/A 32917600
    33 6yfm:BG (2.762) BS01 ZN N/A N/A N/A 32917600
    34 6yfm:BH (2.762) BS01 ZN N/A N/A N/A 32917600
    35 6yfm:BI (2.762) BS01 ZN N/A N/A N/A 32917600
    36 6yfm:BJ (2.762) BS01 ZN N/A N/A N/A 32917600
    37 6yfm:BK (2.762) BS01 ZN N/A N/A N/A 32917600
    38 6yfm:BL (2.762) BS01 ZN N/A N/A N/A 32917600
    39 6yfm:BM (2.762) BS01 ZN N/A N/A N/A 32917600
    40 6yfm:BN (2.762) BS01 ZN N/A N/A N/A 32917600
    41 6yfm:BO (2.762) BS01 ZN N/A N/A N/A 32917600
    42 6yfm:BP (2.762) BS01 ZN N/A N/A N/A 32917600
    43 6yfm:BQ (2.762) BS01 ZN N/A N/A N/A 32917600
    44 6yfm:BR (2.762) BS01 ZN N/A N/A N/A 32917600
    45 6yfm:BS (2.762) BS01 ZN N/A N/A N/A 32917600
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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