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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6xb3:A (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    2 6xb3:A (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    3 6xb3:B (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    4 6xb3:B (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    5 6xb3:C (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    6 6xb3:C (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    7 6xb3:D (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    8 6xb3:D (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    9 6xb3:E (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    10 6xb3:E (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    11 6xb3:F (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    12 6xb3:F (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    13 6xb3:G (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    14 6xb3:G (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    15 6xb3:H (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    16 6xb3:H (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    17 6xb3:I (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    18 6xb3:I (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    19 6xb3:J (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    20 6xb3:J (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    21 6xb3:K (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    22 6xb3:K (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    23 6xb3:L (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    24 6xb3:L (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    25 6xb3:M (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    26 6xb3:M (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    27 6xb3:N (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    28 6xb3:N (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    29 6xb3:O (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    30 6xb3:O (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    31 6xb3:P (1.9) BS01 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    32 6xb3:P (1.9) BS02 9BG 3.1.-.- GO:0004518 ... P08358 33191912
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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