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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6v1g:1 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    2 6v1g:2 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    3 6v1g:3 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    4 6v1g:4 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    5 6v1g:5 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    6 6v1g:6 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    7 6v1g:7 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    8 6v1g:8 (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    9 6v1g:A (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    10 6v1g:B (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    11 6v1g:C (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    12 6v1g:D (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    13 6v1g:E (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    14 6v1g:F (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    15 6v1g:G (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    16 6v1g:H (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    17 6v1g:I (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    18 6v1g:J (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    19 6v1g:K (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    20 6v1g:L (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    21 6v1g:M (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    22 6v1g:N (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    23 6v1g:O (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    24 6v1g:P (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    25 6v1g:Q (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    26 6v1g:R (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    27 6v1g:S (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    28 6v1g:T (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    29 6v1g:U (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    30 6v1g:V (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    31 6v1g:W (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    32 6v1g:X (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    33 6v1g:Y (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    34 6v1g:Z (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    35 6v1g:a (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    36 6v1g:b (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    37 6v1g:c (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    38 6v1g:d (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    39 6v1g:e (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    40 6v1g:f (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    41 6v1g:g (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    42 6v1g:h (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    43 6v1g:i (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    44 6v1g:j (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    45 6v1g:k (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    46 6v1g:l (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    47 6v1g:m (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    48 6v1g:n (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    49 6v1g:o (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    50 6v1g:p (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    51 6v1g:q (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    52 6v1g:r (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    53 6v1g:s (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    54 6v1g:t (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    55 6v1g:u (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    56 6v1g:v (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    57 6v1g:w (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    58 6v1g:x (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    59 6v1g:y (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    60 6v1g:z (2.98) BS01 DA ? GO:0005198 ... Q6JC62 31826994
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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