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BioLiP
Download all results in tab-seperated text for 47 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6qyc:A (2.29) BS01 HEC ? GO:0016491 ... P0DSN4 32289252
    2 6qyc:A (2.29) BS02 HEC ? GO:0016491 ... P0DSN4 32289252
    3 6qyc:A (2.29) BS03 HEC ? GO:0016491 ... P0DSN4 32289252
    4 6qyc:A (2.29) BS04 HEC ? GO:0016491 ... P0DSN4 32289252
    5 6qyc:A (2.29) BS05 HEC ? GO:0016491 ... P0DSN4 32289252
    6 6qyc:A (2.29) BS06 HEC ? GO:0016491 ... P0DSN4 32289252
    7 6qyc:A (2.29) BS07 HEC ? GO:0016491 ... P0DSN4 32289252
    8 6qyc:A (2.29) BS08 HEC ? GO:0016491 ... P0DSN4 32289252
    9 6qyc:A (2.29) BS09 HEC ? GO:0016491 ... P0DSN4 32289252
    10 6qyc:A (2.29) BS10 HEC ? GO:0016491 ... P0DSN4 32289252
    11 6qyc:A (2.29) BS11 CA ? GO:0016491 ... P0DSN4 32289252
    12 6qyc:A (2.29) BS12 CA ? GO:0016491 ... P0DSN4 32289252
    13 6qyc:A (2.29) BS13 HEC ? GO:0016491 ... P0DSN4 32289252
    14 6qyc:A (2.29) BS14 HEC ? GO:0016491 ... P0DSN4 32289252
    15 6qyc:A (2.29) BS15 HEC ? GO:0016491 ... P0DSN4 32289252
    16 6qyc:B (2.29) BS01 HEC ? GO:0016491 ... P0DSN4 32289252
    17 6qyc:B (2.29) BS02 HEC ? GO:0016491 ... P0DSN4 32289252
    18 6qyc:B (2.29) BS03 HEC ? GO:0016491 ... P0DSN4 32289252
    19 6qyc:B (2.29) BS04 HEC ? GO:0016491 ... P0DSN4 32289252
    20 6qyc:B (2.29) BS05 HEC ? GO:0016491 ... P0DSN4 32289252
    21 6qyc:B (2.29) BS06 HEC ? GO:0016491 ... P0DSN4 32289252
    22 6qyc:B (2.29) BS07 HEC ? GO:0016491 ... P0DSN4 32289252
    23 6qyc:B (2.29) BS08 HEC ? GO:0016491 ... P0DSN4 32289252
    24 6qyc:B (2.29) BS09 HEC ? GO:0016491 ... P0DSN4 32289252
    25 6qyc:B (2.29) BS10 HEC ? GO:0016491 ... P0DSN4 32289252
    26 6qyc:B (2.29) BS11 HEC ? GO:0016491 ... P0DSN4 32289252
    27 6qyc:B (2.29) BS12 HEC ? GO:0016491 ... P0DSN4 32289252
    28 6qyc:B (2.29) BS13 CA ? GO:0016491 ... P0DSN4 32289252
    29 6qyc:B (2.29) BS14 CA ? GO:0016491 ... P0DSN4 32289252
    30 6qyc:B (2.29) BS15 CA ? GO:0016491 ... P0DSN4 32289252
    31 6qyc:B (2.29) BS16 HEC ? GO:0016491 ... P0DSN4 32289252
    32 6qyc:C (2.29) BS01 HEC ? GO:0016491 ... P0DSN4 32289252
    33 6qyc:C (2.29) BS02 HEC ? GO:0016491 ... P0DSN4 32289252
    34 6qyc:C (2.29) BS03 HEC ? GO:0016491 ... P0DSN4 32289252
    35 6qyc:C (2.29) BS04 HEC ? GO:0016491 ... P0DSN4 32289252
    36 6qyc:C (2.29) BS05 HEC ? GO:0016491 ... P0DSN4 32289252
    37 6qyc:C (2.29) BS06 HEC ? GO:0016491 ... P0DSN4 32289252
    38 6qyc:C (2.29) BS07 HEC ? GO:0016491 ... P0DSN4 32289252
    39 6qyc:C (2.29) BS08 HEC ? GO:0016491 ... P0DSN4 32289252
    40 6qyc:C (2.29) BS09 HEC ? GO:0016491 ... P0DSN4 32289252
    41 6qyc:C (2.29) BS10 HEC ? GO:0016491 ... P0DSN4 32289252
    42 6qyc:C (2.29) BS11 HEC ? GO:0016491 ... P0DSN4 32289252
    43 6qyc:C (2.29) BS12 HEC ? GO:0016491 ... P0DSN4 32289252
    44 6qyc:C (2.29) BS13 HEC ? GO:0016491 ... P0DSN4 32289252
    45 6qyc:C (2.29) BS14 CA ? GO:0016491 ... P0DSN4 32289252
    46 6qyc:C (2.29) BS15 CA ? GO:0016491 ... P0DSN4 32289252
    47 6qyc:C (2.29) BS16 CA ? GO:0016491 ... P0DSN4 32289252
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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