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BioLiP
Download all results in tab-seperated text for 28 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6j5k:A (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    2 6j5k:AA (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    3 6j5k:AB (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    4 6j5k:AC (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    5 6j5k:AD (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    6 6j5k:AD (6.2) BS02 MG 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    7 6j5k:AF (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    8 6j5k:B (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    9 6j5k:BA (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    10 6j5k:BB (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    11 6j5k:BB (6.2) BS02 MG ? GO:0005524 ... P80021 31197009
    12 6j5k:BC (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    13 6j5k:BD (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    14 6j5k:BD (6.2) BS02 MG 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    15 6j5k:BF (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    16 6j5k:Ba (6.2) BS01 peptide ? GO:0005739 ... Q35915 31197009
    17 6j5k:C (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    18 6j5k:CA (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    19 6j5k:CB (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    20 6j5k:CB (6.2) BS02 MG ? GO:0005524 ... P80021 31197009
    21 6j5k:CC (6.2) BS01 ATP ? GO:0005524 ... P80021 31197009
    22 6j5k:CD (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    23 6j5k:CD (6.2) BS02 MG 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    24 6j5k:CF (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    25 6j5k:Ca (6.2) BS01 peptide ? GO:0005739 ... Q35915 31197009
    26 6j5k:D (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    27 6j5k:D (6.2) BS02 MG 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    28 6j5k:F (6.2) BS01 ADP 7.1.2.2 GO:0005524 ... K7GLT8 31197009
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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