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BioLiP
Download all results in tab-seperated text for 54 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6izr:1 (4.7) BS01 ADP N/A N/A N/A 31253774
    2 6izr:1 (4.7) BS02 MG N/A N/A N/A 31253774
    3 6izr:2 (4.7) BS01 ADP N/A N/A N/A 31253774
    4 6izr:2 (4.7) BS02 MG N/A N/A N/A 31253774
    5 6izr:A (4.7) BS01 ADP N/A N/A N/A 31253774
    6 6izr:A (4.7) BS02 MG N/A N/A N/A 31253774
    7 6izr:B (4.7) BS01 ADP N/A N/A N/A 31253774
    8 6izr:B (4.7) BS02 MG N/A N/A N/A 31253774
    9 6izr:D (4.7) BS01 ADP N/A N/A N/A 31253774
    10 6izr:D (4.7) BS02 MG N/A N/A N/A 31253774
    11 6izr:E (4.7) BS01 ADP N/A N/A N/A 31253774
    12 6izr:G (4.7) BS01 ADP N/A N/A N/A 31253774
    13 6izr:H (4.7) BS01 ADP N/A N/A N/A 31253774
    14 6izr:H (4.7) BS02 MG N/A N/A N/A 31253774
    15 6izr:J (4.7) BS01 ADP N/A N/A N/A 31253774
    16 6izr:J (4.7) BS02 MG N/A N/A N/A 31253774
    17 6izr:K (4.7) BS01 ADP N/A N/A N/A 31253774
    18 6izr:K (4.7) BS02 MG N/A N/A N/A 31253774
    19 6izr:M (4.7) BS01 ADP N/A N/A N/A 31253774
    20 6izr:M (4.7) BS02 MG N/A N/A N/A 31253774
    21 6izr:N (4.7) BS01 ADP N/A N/A N/A 31253774
    22 6izr:P (4.7) BS01 ADP N/A N/A N/A 31253774
    23 6izr:Q (4.7) BS01 ADP N/A N/A N/A 31253774
    24 6izr:Q (4.7) BS02 MG N/A N/A N/A 31253774
    25 6izr:b (4.7) BS01 ADP N/A N/A N/A 31253774
    26 6izr:b (4.7) BS02 MG N/A N/A N/A 31253774
    27 6izr:c (4.7) BS01 ADP N/A N/A N/A 31253774
    28 6izr:c (4.7) BS02 MG N/A N/A N/A 31253774
    29 6izr:e (4.7) BS01 ADP N/A N/A N/A 31253774
    30 6izr:e (4.7) BS02 MG N/A N/A N/A 31253774
    31 6izr:f (4.7) BS01 ADP N/A N/A N/A 31253774
    32 6izr:f (4.7) BS02 MG N/A N/A N/A 31253774
    33 6izr:h (4.7) BS01 ADP N/A N/A N/A 31253774
    34 6izr:h (4.7) BS02 MG N/A N/A N/A 31253774
    35 6izr:i (4.7) BS01 ADP N/A N/A N/A 31253774
    36 6izr:i (4.7) BS02 MG N/A N/A N/A 31253774
    37 6izr:k (4.7) BS01 ADP N/A N/A N/A 31253774
    38 6izr:l (4.7) BS01 ADP N/A N/A N/A 31253774
    39 6izr:l (4.7) BS02 MG N/A N/A N/A 31253774
    40 6izr:n (4.7) BS01 ADP N/A N/A N/A 31253774
    41 6izr:n (4.7) BS02 MG N/A N/A N/A 31253774
    42 6izr:o (4.7) BS01 ADP N/A N/A N/A 31253774
    43 6izr:q (4.7) BS01 ADP N/A N/A N/A 31253774
    44 6izr:q (4.7) BS02 MG N/A N/A N/A 31253774
    45 6izr:r (4.7) BS01 ADP N/A N/A N/A 31253774
    46 6izr:r (4.7) BS02 MG N/A N/A N/A 31253774
    47 6izr:t (4.7) BS01 ADP N/A N/A N/A 31253774
    48 6izr:t (4.7) BS02 MG N/A N/A N/A 31253774
    49 6izr:u (4.7) BS01 ADP N/A N/A N/A 31253774
    50 6izr:u (4.7) BS02 MG N/A N/A N/A 31253774
    51 6izr:w (4.7) BS01 ADP N/A N/A N/A 31253774
    52 6izr:w (4.7) BS02 MG N/A N/A N/A 31253774
    53 6izr:x (4.7) BS01 ADP N/A N/A N/A 31253774
    54 6izr:x (4.7) BS02 MG N/A N/A N/A 31253774
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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