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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5x7r:A (1.95) BS01 BGC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    2 5x7r:A (1.95) BS02 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    3 5x7r:A (1.95) BS03 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    4 5x7r:A (1.95) BS04 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    5 5x7r:A (1.95) BS05 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    6 5x7r:A (1.95) BS06 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    7 5x7r:A (1.95) BS07 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    8 5x7r:A (1.95) BS08 AC1 '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    9 5x7r:A (1.95) BS09 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    10 5x7r:A (1.95) BS10 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    11 5x7r:A (1.95) BS11 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    12 5x7r:A (1.95) BS12 BGC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    13 5x7r:A (1.95) BS13 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    14 5x7r:A (1.95) BS14 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    15 5x7r:A (1.95) BS15 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    16 5x7r:A (1.95) BS16 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    17 5x7r:A (1.95) BS17 BGC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    18 5x7r:B (1.95) BS01 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    19 5x7r:B (1.95) BS02 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    20 5x7r:B (1.95) BS03 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    21 5x7r:B (1.95) BS04 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    22 5x7r:B (1.95) BS05 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    23 5x7r:B (1.95) BS06 AC1 '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    24 5x7r:B (1.95) BS07 BGC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    25 5x7r:B (1.95) BS08 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    26 5x7r:B (1.95) BS09 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    27 5x7r:B (1.95) BS10 CA '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    28 5x7r:B (1.95) BS11 BGC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    29 5x7r:B (1.95) BS12 GLC '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    30 5x7r:B (1.95) BS13 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    31 5x7r:B (1.95) BS14 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    32 5x7r:B (1.95) BS15 MG '2.4.1.-
    3.2.1.20'    		 GO:0003824 ... A0A193PKW5 28698247
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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