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BioLiP
Download all results in tab-seperated text for 43 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5wtl:A (2.298) BS01 CA ? GO:0005509 ... C2M2E7 28807152
    2 5wtl:A (2.298) BS02 CA ? GO:0005509 ... C2M2E7 28807152
    3 5wtl:A (2.298) BS03 CA ? GO:0005509 ... C2M2E7 28807152
    4 5wtl:A (2.298) BS04 CA ? GO:0005509 ... C2M2E7 28807152
    5 5wtl:A (2.298) BS05 CA ? GO:0005509 ... C2M2E7 28807152
    6 5wtl:A (2.298) BS06 CA ? GO:0005509 ... C2M2E7 28807152
    7 5wtl:A (2.298) BS07 CA ? GO:0005509 ... C2M2E7 28807152
    8 5wtl:A (2.298) BS08 CA ? GO:0005509 ... C2M2E7 28807152
    9 5wtl:A (2.298) BS09 CA ? GO:0005509 ... C2M2E7 28807152
    10 5wtl:A (2.298) BS10 CA ? GO:0005509 ... C2M2E7 28807152
    11 5wtl:A (2.298) BS11 CA ? GO:0005509 ... C2M2E7 28807152
    12 5wtl:B (2.298) BS01 CA ? GO:0005509 ... C2M2E7 28807152
    13 5wtl:B (2.298) BS02 CA ? GO:0005509 ... C2M2E7 28807152
    14 5wtl:B (2.298) BS03 CA ? GO:0005509 ... C2M2E7 28807152
    15 5wtl:B (2.298) BS04 CA ? GO:0005509 ... C2M2E7 28807152
    16 5wtl:B (2.298) BS05 CA ? GO:0005509 ... C2M2E7 28807152
    17 5wtl:B (2.298) BS06 CA ? GO:0005509 ... C2M2E7 28807152
    18 5wtl:B (2.298) BS07 CA ? GO:0005509 ... C2M2E7 28807152
    19 5wtl:B (2.298) BS08 CA ? GO:0005509 ... C2M2E7 28807152
    20 5wtl:B (2.298) BS09 CA ? GO:0005509 ... C2M2E7 28807152
    21 5wtl:B (2.298) BS10 CA ? GO:0005509 ... C2M2E7 28807152
    22 5wtl:B (2.298) BS11 CA ? GO:0005509 ... C2M2E7 28807152
    23 5wtl:C (2.298) BS01 CA ? GO:0005509 ... C2M2E7 28807152
    24 5wtl:C (2.298) BS02 CA ? GO:0005509 ... C2M2E7 28807152
    25 5wtl:C (2.298) BS03 CA ? GO:0005509 ... C2M2E7 28807152
    26 5wtl:C (2.298) BS04 CA ? GO:0005509 ... C2M2E7 28807152
    27 5wtl:C (2.298) BS05 CA ? GO:0005509 ... C2M2E7 28807152
    28 5wtl:C (2.298) BS06 CA ? GO:0005509 ... C2M2E7 28807152
    29 5wtl:C (2.298) BS07 CA ? GO:0005509 ... C2M2E7 28807152
    30 5wtl:C (2.298) BS08 CA ? GO:0005509 ... C2M2E7 28807152
    31 5wtl:C (2.298) BS09 CA ? GO:0005509 ... C2M2E7 28807152
    32 5wtl:C (2.298) BS10 CA ? GO:0005509 ... C2M2E7 28807152
    33 5wtl:C (2.298) BS11 CA ? GO:0005509 ... C2M2E7 28807152
    34 5wtl:D (2.298) BS01 CA ? GO:0005509 ... C2M2E7 28807152
    35 5wtl:D (2.298) BS02 CA ? GO:0005509 ... C2M2E7 28807152
    36 5wtl:D (2.298) BS03 CA ? GO:0005509 ... C2M2E7 28807152
    37 5wtl:D (2.298) BS04 CA ? GO:0005509 ... C2M2E7 28807152
    38 5wtl:D (2.298) BS05 CA ? GO:0005509 ... C2M2E7 28807152
    39 5wtl:D (2.298) BS06 CA ? GO:0005509 ... C2M2E7 28807152
    40 5wtl:D (2.298) BS07 CA ? GO:0005509 ... C2M2E7 28807152
    41 5wtl:D (2.298) BS08 CA ? GO:0005509 ... C2M2E7 28807152
    42 5wtl:D (2.298) BS09 CA ? GO:0005509 ... C2M2E7 28807152
    43 5wtl:D (2.298) BS10 CA ? GO:0005509 ... C2M2E7 28807152
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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