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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5w5t:A (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    2 5w5t:B (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    3 5w5t:C (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    4 5w5t:D (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    5 5w5t:E (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    6 5w5t:F (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    7 5w5t:G (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    8 5w5t:H (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    9 5w5t:I (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    10 5w5t:J (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    11 5w5t:K (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    12 5w5t:L (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    13 5w5t:M (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    14 5w5t:N (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    15 5w5t:O (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    16 5w5t:P (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    17 5w5t:Q (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    18 5w5t:R (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    19 5w5t:T (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    20 5w5t:Z (1.76) BS01 9X7 2.7.7.27 GO:0005524 ... P39669 30401744
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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