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BioLiP
Download all results in tab-seperated text for 33 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5t9t:A (3.5) BS01 CA ? GO:0005509 ... Q8K486 27782885
    2 5t9t:A (3.5) BS02 CA ? GO:0005509 ... Q8K486 27782885
    3 5t9t:A (3.5) BS03 CA ? GO:0005509 ... Q8K486 27782885
    4 5t9t:A (3.5) BS04 CA ? GO:0005509 ... Q8K486 27782885
    5 5t9t:A (3.5) BS05 CA ? GO:0005509 ... Q8K486 27782885
    6 5t9t:A (3.5) BS06 CA ? GO:0005509 ... Q8K486 27782885
    7 5t9t:A (3.5) BS07 CA ? GO:0005509 ... Q8K486 27782885
    8 5t9t:A (3.5) BS08 CA ? GO:0005509 ... Q8K486 27782885
    9 5t9t:A (3.5) BS09 CA ? GO:0005509 ... Q8K486 27782885
    10 5t9t:A (3.5) BS10 CA ? GO:0005509 ... Q8K486 27782885
    11 5t9t:A (3.5) BS11 CA ? GO:0005509 ... Q8K486 27782885
    12 5t9t:A (3.5) BS12 CA ? GO:0005509 ... Q8K486 27782885
    13 5t9t:A (3.5) BS13 MAN ? GO:0005509 ... Q8K486 27782885
    14 5t9t:A (3.5) BS14 MAN ? GO:0005509 ... Q8K486 27782885
    15 5t9t:A (3.5) BS15 MAN ? GO:0005509 ... Q8K486 27782885
    16 5t9t:A (3.5) BS16 MAN ? GO:0005509 ... Q8K486 27782885
    17 5t9t:B (3.5) BS01 CA ? GO:0005509 ... Q8K486 27782885
    18 5t9t:B (3.5) BS02 CA ? GO:0005509 ... Q8K486 27782885
    19 5t9t:B (3.5) BS03 CA ? GO:0005509 ... Q8K486 27782885
    20 5t9t:B (3.5) BS04 CA ? GO:0005509 ... Q8K486 27782885
    21 5t9t:B (3.5) BS05 CA ? GO:0005509 ... Q8K486 27782885
    22 5t9t:B (3.5) BS06 CA ? GO:0005509 ... Q8K486 27782885
    23 5t9t:B (3.5) BS07 CA ? GO:0005509 ... Q8K486 27782885
    24 5t9t:B (3.5) BS08 CA ? GO:0005509 ... Q8K486 27782885
    25 5t9t:B (3.5) BS09 CA ? GO:0005509 ... Q8K486 27782885
    26 5t9t:B (3.5) BS10 CA ? GO:0005509 ... Q8K486 27782885
    27 5t9t:B (3.5) BS11 CA ? GO:0005509 ... Q8K486 27782885
    28 5t9t:B (3.5) BS12 CA ? GO:0005509 ... Q8K486 27782885
    29 5t9t:B (3.5) BS13 CA ? GO:0005509 ... Q8K486 27782885
    30 5t9t:B (3.5) BS14 CA ? GO:0005509 ... Q8K486 27782885
    31 5t9t:B (3.5) BS15 MAN ? GO:0005509 ... Q8K486 27782885
    32 5t9t:B (3.5) BS16 MAN ? GO:0005509 ... Q8K486 27782885
    33 5t9t:B (3.5) BS17 MAN ? GO:0005509 ... Q8K486 27782885
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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