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BioLiP
Download all results in tab-seperated text for 54 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5crg:A (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    2 5crg:A (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    3 5crg:A (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    4 5crg:A (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    5 5crg:A (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    6 5crg:A (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    7 5crg:A (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    8 5crg:A (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    9 5crg:A (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    10 5crg:A (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    11 5crg:A (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    12 5crg:A (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    13 5crg:A (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    14 5crg:B (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    15 5crg:B (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    16 5crg:B (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    17 5crg:B (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    18 5crg:B (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    19 5crg:B (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    20 5crg:B (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    21 5crg:B (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    22 5crg:B (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    23 5crg:B (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    24 5crg:B (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    25 5crg:B (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    26 5crg:B (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    27 5crg:B (1.97) BS14 CA ? GO:0005509 ... P31415 26416891
    28 5crg:C (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    29 5crg:C (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    30 5crg:C (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    31 5crg:C (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    32 5crg:C (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    33 5crg:C (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    34 5crg:C (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    35 5crg:C (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    36 5crg:C (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    37 5crg:C (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    38 5crg:C (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    39 5crg:C (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    40 5crg:C (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    41 5crg:D (1.97) BS01 CA ? GO:0005509 ... P31415 26416891
    42 5crg:D (1.97) BS02 CA ? GO:0005509 ... P31415 26416891
    43 5crg:D (1.97) BS03 CA ? GO:0005509 ... P31415 26416891
    44 5crg:D (1.97) BS04 CA ? GO:0005509 ... P31415 26416891
    45 5crg:D (1.97) BS05 CA ? GO:0005509 ... P31415 26416891
    46 5crg:D (1.97) BS06 CA ? GO:0005509 ... P31415 26416891
    47 5crg:D (1.97) BS07 CA ? GO:0005509 ... P31415 26416891
    48 5crg:D (1.97) BS08 CA ? GO:0005509 ... P31415 26416891
    49 5crg:D (1.97) BS09 CA ? GO:0005509 ... P31415 26416891
    50 5crg:D (1.97) BS10 CA ? GO:0005509 ... P31415 26416891
    51 5crg:D (1.97) BS11 CA ? GO:0005509 ... P31415 26416891
    52 5crg:D (1.97) BS12 CA ? GO:0005509 ... P31415 26416891
    53 5crg:D (1.97) BS13 CA ? GO:0005509 ... P31415 26416891
    54 5crg:D (1.97) BS14 CA ? GO:0005509 ... P31415 26416891
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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