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BioLiP
Download all results in tab-seperated text for 47 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4x2t:A (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    2 4x2t:A (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    3 4x2t:A (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    4 4x2t:A (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    5 4x2t:B (2.729) BS01 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    6 4x2t:B (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    7 4x2t:B (2.729) BS03 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    8 4x2t:B (2.729) BS04 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    9 4x2t:C (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    10 4x2t:C (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    11 4x2t:C (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    12 4x2t:C (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    13 4x2t:D (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    14 4x2t:D (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    15 4x2t:D (2.729) BS03 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    16 4x2t:E (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    17 4x2t:E (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    18 4x2t:E (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    19 4x2t:E (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    20 4x2t:F (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    21 4x2t:F (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    22 4x2t:F (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    23 4x2t:F (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    24 4x2t:G (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    25 4x2t:G (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    26 4x2t:G (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    27 4x2t:G (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    28 4x2t:H (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    29 4x2t:H (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    30 4x2t:H (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    31 4x2t:H (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    32 4x2t:I (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    33 4x2t:I (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    34 4x2t:I (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    35 4x2t:I (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    36 4x2t:J (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    37 4x2t:J (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    38 4x2t:J (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    39 4x2t:J (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    40 4x2t:K (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    41 4x2t:K (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    42 4x2t:K (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    43 4x2t:K (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    44 4x2t:L (2.729) BS01 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    45 4x2t:L (2.729) BS02 ZN 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    46 4x2t:L (2.729) BS03 TOD 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    47 4x2t:L (2.729) BS04 CO3 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25645579
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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