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BioLiP
Download all results in tab-seperated text for 98 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4toa:A (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    2 4toa:A (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    3 4toa:A (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    4 4toa:A (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    5 4toa:B (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    6 4toa:B (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    7 4toa:B (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    8 4toa:B (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    9 4toa:C (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    10 4toa:C (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    11 4toa:C (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    12 4toa:C (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    13 4toa:D (1.95) BS01 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    14 4toa:D (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    15 4toa:D (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    16 4toa:D (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    17 4toa:E (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    18 4toa:E (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    19 4toa:E (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    20 4toa:E (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    21 4toa:F (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    22 4toa:F (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    23 4toa:F (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    24 4toa:F (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    25 4toa:G (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    26 4toa:G (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    27 4toa:G (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    28 4toa:G (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    29 4toa:H (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    30 4toa:H (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    31 4toa:H (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    32 4toa:H (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    33 4toa:I (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    34 4toa:I (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    35 4toa:I (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    36 4toa:I (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    37 4toa:J (1.95) BS01 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    38 4toa:J (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    39 4toa:J (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    40 4toa:J (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    41 4toa:K (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    42 4toa:K (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    43 4toa:K (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    44 4toa:K (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    45 4toa:L (1.95) BS01 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    46 4toa:L (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    47 4toa:L (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    48 4toa:L (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    49 4toa:M (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    50 4toa:M (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    51 4toa:M (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    52 4toa:M (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    53 4toa:N (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    54 4toa:N (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    55 4toa:N (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    56 4toa:N (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    57 4toa:O (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    58 4toa:O (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    59 4toa:O (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    60 4toa:O (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    61 4toa:P (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    62 4toa:P (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    63 4toa:P (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    64 4toa:P (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    65 4toa:P (1.95) BS05 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    66 4toa:Q (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    67 4toa:Q (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    68 4toa:Q (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    69 4toa:Q (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    70 4toa:R (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    71 4toa:R (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    72 4toa:R (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    73 4toa:R (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    74 4toa:S (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    75 4toa:S (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    76 4toa:S (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    77 4toa:S (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    78 4toa:T (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    79 4toa:T (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    80 4toa:T (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    81 4toa:T (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    82 4toa:U (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    83 4toa:U (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    84 4toa:U (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    85 4toa:U (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    86 4toa:V (1.95) BS01 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    87 4toa:V (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    88 4toa:V (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    89 4toa:V (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    90 4toa:W (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    91 4toa:W (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    92 4toa:W (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    93 4toa:W (1.95) BS04 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    94 4toa:W (1.95) BS05 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    95 4toa:X (1.95) BS01 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    96 4toa:X (1.95) BS02 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    97 4toa:X (1.95) BS03 FE2 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    98 4toa:X (1.95) BS04 HEM 1.16.3.1 GO:0004322 ... Q9HY79 25640193
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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