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BioLiP
Download all results in tab-seperated text for 81 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 3a68:A (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    2 3a68:A (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    3 3a68:A (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    4 3a68:A (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    5 3a68:B (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    6 3a68:B (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    7 3a68:B (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    8 3a68:C (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    9 3a68:C (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    10 3a68:C (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    11 3a68:D (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    12 3a68:D (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    13 3a68:D (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    14 3a68:D (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    15 3a68:E (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    16 3a68:E (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    17 3a68:E (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    18 3a68:E (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    19 3a68:F (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    20 3a68:F (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    21 3a68:F (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    22 3a68:G (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    23 3a68:G (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    24 3a68:G (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    25 3a68:H (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    26 3a68:H (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    27 3a68:H (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    28 3a68:I (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    29 3a68:I (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    30 3a68:I (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    31 3a68:J (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    32 3a68:J (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    33 3a68:J (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    34 3a68:K (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    35 3a68:K (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    36 3a68:K (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    37 3a68:L (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    38 3a68:L (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    39 3a68:L (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    40 3a68:L (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    41 3a68:M (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    42 3a68:M (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    43 3a68:M (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    44 3a68:N (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    45 3a68:N (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    46 3a68:N (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    47 3a68:O (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    48 3a68:O (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    49 3a68:O (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    50 3a68:O (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    51 3a68:P (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    52 3a68:P (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    53 3a68:P (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    54 3a68:Q (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    55 3a68:Q (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    56 3a68:Q (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    57 3a68:Q (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    58 3a68:R (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    59 3a68:R (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    60 3a68:R (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    61 3a68:S (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    62 3a68:S (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    63 3a68:S (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    64 3a68:S (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    65 3a68:T (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    66 3a68:T (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    67 3a68:T (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    68 3a68:U (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    69 3a68:U (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    70 3a68:U (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    71 3a68:U (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    72 3a68:V (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    73 3a68:V (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    74 3a68:V (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    75 3a68:W (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    76 3a68:W (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    77 3a68:W (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    78 3a68:X (1.8) BS01 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    79 3a68:X (1.8) BS02 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    80 3a68:X (1.8) BS03 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    81 3a68:X (1.8) BS04 CA 1.16.3.1 GO:0006826 ... Q948P5 20007325
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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