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BioLiP
Download all results in tab-seperated text for 19 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2zxw:A (2.5) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    2 2zxw:A (2.5) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    3 2zxw:A (2.5) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    4 2zxw:A (2.5) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    5 2zxw:A (2.5) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    6 2zxw:B (2.5) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 19164527
    7 2zxw:B (2.5) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    8 2zxw:C (2.5) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    9 2zxw:F (2.5) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    10 2zxw:M (2.5) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    11 2zxw:N (2.5) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    12 2zxw:N (2.5) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    13 2zxw:N (2.5) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    14 2zxw:N (2.5) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    15 2zxw:N (2.5) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    16 2zxw:O (2.5) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    17 2zxw:P (2.5) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    18 2zxw:S (2.5) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    19 2zxw:Z (2.5) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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