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BioLiP
Download all results in tab-seperated text for 52 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2v18:A (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    2 2v18:A (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    3 2v18:A (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    4 2v18:B (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    5 2v18:B (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    6 2v18:B (2.59) BS03 COA ? GO:0000166 ... Q5SIE3 17855371
    7 2v18:B (2.59) BS04 COA ? GO:0000166 ... Q5SIE3 17855371
    8 2v18:B (2.59) BS05 FMN ? GO:0000166 ... Q5SIE3 17855371
    9 2v18:C (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    10 2v18:C (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    11 2v18:C (2.59) BS03 COA ? GO:0000166 ... Q5SIE3 17855371
    12 2v18:C (2.59) BS04 FMN ? GO:0000166 ... Q5SIE3 17855371
    13 2v18:C (2.59) BS05 COA ? GO:0000166 ... Q5SIE3 17855371
    14 2v18:D (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    15 2v18:D (2.59) BS02 COA ? GO:0000166 ... Q5SIE3 17855371
    16 2v18:D (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    17 2v18:D (2.59) BS04 FMN ? GO:0000166 ... Q5SIE3 17855371
    18 2v18:D (2.59) BS05 COA ? GO:0000166 ... Q5SIE3 17855371
    19 2v18:E (2.59) BS01 COA ? GO:0000166 ... Q5SIE3 17855371
    20 2v18:E (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    21 2v18:E (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    22 2v18:E (2.59) BS04 COA ? GO:0000166 ... Q5SIE3 17855371
    23 2v18:F (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    24 2v18:F (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    25 2v18:F (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    26 2v18:F (2.59) BS04 COA ? GO:0000166 ... Q5SIE3 17855371
    27 2v18:F (2.59) BS05 COA ? GO:0000166 ... Q5SIE3 17855371
    28 2v18:G (2.59) BS01 COA ? GO:0000166 ... Q5SIE3 17855371
    29 2v18:G (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    30 2v18:G (2.59) BS03 COA ? GO:0000166 ... Q5SIE3 17855371
    31 2v18:G (2.59) BS04 FMN ? GO:0000166 ... Q5SIE3 17855371
    32 2v18:H (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    33 2v18:H (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    34 2v18:H (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    35 2v18:I (2.59) BS01 COA ? GO:0000166 ... Q5SIE3 17855371
    36 2v18:I (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    37 2v18:I (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    38 2v18:I (2.59) BS04 COA ? GO:0000166 ... Q5SIE3 17855371
    39 2v18:I (2.59) BS05 FMN ? GO:0000166 ... Q5SIE3 17855371
    40 2v18:J (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    41 2v18:J (2.59) BS02 COA ? GO:0000166 ... Q5SIE3 17855371
    42 2v18:J (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    43 2v18:J (2.59) BS04 COA ? GO:0000166 ... Q5SIE3 17855371
    44 2v18:J (2.59) BS05 FMN ? GO:0000166 ... Q5SIE3 17855371
    45 2v18:K (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    46 2v18:K (2.59) BS02 COA ? GO:0000166 ... Q5SIE3 17855371
    47 2v18:K (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    48 2v18:K (2.59) BS04 FMN ? GO:0000166 ... Q5SIE3 17855371
    49 2v18:K (2.59) BS05 COA ? GO:0000166 ... Q5SIE3 17855371
    50 2v18:L (2.59) BS01 FMN ? GO:0000166 ... Q5SIE3 17855371
    51 2v18:L (2.59) BS02 FMN ? GO:0000166 ... Q5SIE3 17855371
    52 2v18:L (2.59) BS03 FMN ? GO:0000166 ... Q5SIE3 17855371
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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