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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 772 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 7umh:q (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    602 7umh:q (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    603 7umh:q (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    604 7umh:q (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    605 7umh:q (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    606 7umh:q (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    607 7umh:q (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    608 7umh:q (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    609 7umh:q (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    610 7umh:q (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    611 7umh:q (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    612 7umh:q (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    613 7umh:q (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    614 7umh:q (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    615 7umh:q (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    616 7umh:q (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    617 7umh:q (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    618 7umh:q (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    619 7umh:r (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    620 7umh:r (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    621 7umh:r (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    622 7umh:r (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    623 7umh:r (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    624 7umh:r (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    625 7umh:r (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    626 7umh:r (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    627 7umh:r (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    628 7umh:r (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    629 7umh:r (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    630 7umh:r (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    631 7umh:r (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    632 7umh:r (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    633 7umh:r (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    634 7umh:r (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    635 7umh:r (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    636 7umh:r (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    637 7umh:r (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    638 7umh:s (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    639 7umh:s (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    640 7umh:s (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    641 7umh:s (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    642 7umh:s (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    643 7umh:s (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    644 7umh:s (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    645 7umh:s (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    646 7umh:s (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    647 7umh:s (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    648 7umh:s (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    649 7umh:s (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    650 7umh:s (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    651 7umh:s (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    652 7umh:s (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    653 7umh:s (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    654 7umh:s (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    655 7umh:s (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    656 7umh:s (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    657 7umh:t (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    658 7umh:t (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    659 7umh:t (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    660 7umh:t (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    661 7umh:t (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    662 7umh:t (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    663 7umh:t (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    664 7umh:t (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    665 7umh:t (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    666 7umh:t (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    667 7umh:t (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    668 7umh:t (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    669 7umh:t (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    670 7umh:t (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    671 7umh:t (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    672 7umh:t (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    673 7umh:t (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    674 7umh:t (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    675 7umh:t (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    676 7umh:u (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    677 7umh:u (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    678 7umh:u (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    679 7umh:u (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    680 7umh:u (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    681 7umh:u (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    682 7umh:u (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    683 7umh:u (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    684 7umh:u (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    685 7umh:u (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    686 7umh:u (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    687 7umh:u (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    688 7umh:u (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    689 7umh:u (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    690 7umh:u (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    691 7umh:u (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    692 7umh:u (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    693 7umh:u (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    694 7umh:u (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    695 7umh:u (2.6) BS20 CLA ? GO:0005886 ... Q55274 37532717
    696 7umh:v (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    697 7umh:v (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    698 7umh:v (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    699 7umh:v (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    700 7umh:v (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    701 7umh:v (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    702 7umh:v (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    703 7umh:v (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    704 7umh:v (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    705 7umh:v (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    706 7umh:v (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    707 7umh:v (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    708 7umh:v (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    709 7umh:v (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    710 7umh:v (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    711 7umh:v (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    712 7umh:v (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    713 7umh:v (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    714 7umh:v (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    715 7umh:w (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    716 7umh:w (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    717 7umh:w (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    718 7umh:w (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    719 7umh:w (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    720 7umh:w (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    721 7umh:w (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    722 7umh:w (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    723 7umh:w (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    724 7umh:w (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    725 7umh:w (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    726 7umh:w (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    727 7umh:w (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    728 7umh:w (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    729 7umh:w (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    730 7umh:w (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    731 7umh:w (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    732 7umh:w (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    733 7umh:w (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    734 7umh:w (2.6) BS20 CLA ? GO:0005886 ... Q55274 37532717
    735 7umh:x (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    736 7umh:x (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    737 7umh:x (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    738 7umh:x (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    739 7umh:x (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    740 7umh:x (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    741 7umh:x (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    742 7umh:x (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    743 7umh:x (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    744 7umh:x (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    745 7umh:x (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    746 7umh:x (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    747 7umh:x (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    748 7umh:x (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    749 7umh:x (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    750 7umh:x (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    751 7umh:x (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    752 7umh:x (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    753 7umh:x (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    754 7umh:y (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    755 7umh:y (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    756 7umh:y (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    757 7umh:y (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    758 7umh:y (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    759 7umh:y (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    760 7umh:y (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    761 7umh:y (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    762 7umh:y (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    763 7umh:y (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    764 7umh:y (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    765 7umh:y (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    766 7umh:y (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    767 7umh:y (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    768 7umh:y (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    769 7umh:y (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    770 7umh:y (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    771 7umh:y (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    772 7umh:y (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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