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BioLiP
Download all results in tab-seperated text for 37 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7tbm:A1 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    2 7tbm:A1 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    3 7tbm:A2 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    4 7tbm:A2 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    5 7tbm:A2 (37.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    6 7tbm:A3 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    7 7tbm:A3 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    8 7tbm:A4 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    9 7tbm:A4 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    10 7tbm:A4 (37.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    11 7tbm:A5 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    12 7tbm:A5 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    13 7tbm:A5 (37.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    14 7tbm:A6 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    15 7tbm:A6 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    16 7tbm:D1 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    17 7tbm:D2 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    18 7tbm:D3 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    19 7tbm:D4 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    20 7tbm:D5 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    21 7tbm:D6 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    22 7tbm:D7 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    23 7tbm:F1 (37.0) BS01 peptide N/A GO:0017056 ... N/A 35679405
    24 7tbm:F2 (37.0) BS01 peptide N/A GO:0017056 ... N/A 35679405
    25 7tbm:I1 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    26 7tbm:I1 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    27 7tbm:I1 (37.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    28 7tbm:I2 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    29 7tbm:I2 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    30 7tbm:I2 (37.0) BS03 peptide N/A GO:0005643 ... N/A 35679405
    31 7tbm:I3 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    32 7tbm:I3 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    33 7tbm:I4 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    34 7tbm:I4 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    35 7tbm:I5 (37.0) BS01 peptide N/A GO:0005643 ... N/A 35679405
    36 7tbm:I5 (37.0) BS02 peptide N/A GO:0005643 ... N/A 35679405
    37 7tbm:X1 (37.0) BS01 peptide N/A N/A N/A 35679405
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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