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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6wnt:A (3.1) BS01 rna ? GO:0002181 ... P0A7M9 32518240
    2 6wnt:B (3.1) BS01 rna ? GO:0000027 ... P0A7N4 32518240
    3 6wnt:D (3.1) BS01 rna ? GO:0002181 ... P0A7P5 32518240
    4 6wnt:E (3.1) BS01 rna ? GO:0002181 ... P0A7Q1 32518240
    5 6wnt:F (3.1) BS01 rna ? GO:0002181 ... P0A7Q6 32518240
    6 6wnt:a (3.1) BS01 rna ? GO:0000027 ... P0A7L0 32518240
    7 6wnt:b (3.1) BS01 rna ? GO:0000027 ... P60422 32518240
    8 6wnt:c (3.1) BS01 rna ? GO:0000027 ... P60438 32518240
    9 6wnt:d (3.1) BS01 rna ? GO:0001070 ... P60723 32518240
    10 6wnt:e (3.1) BS01 rna ? GO:0000027 ... P62399 32518240
    11 6wnt:f (3.1) BS01 rna ? GO:0000027 ... P0AG55 32518240
    12 6wnt:g (3.1) BS01 rna ? GO:0002181 ... P0A7R1 32518240
    13 6wnt:h (3.1) BS01 rna ? GO:0003735 ... P0A7J3 32518240
    14 6wnt:i (3.1) BS01 rna ? GO:0000027 ... P0A7J7 32518240
    15 6wnt:j (3.1) BS01 rna ? GO:0002181 ... P0AA10 32518240
    16 6wnt:k (3.1) BS01 rna ? GO:0002181 ... P0ADY3 32518240
    17 6wnt:l (3.1) BS01 rna ? GO:0002181 ... P02413 32518240
    18 6wnt:n (3.1) BS01 rna ? GO:0000027 ... P0AG44 32518240
    19 6wnt:o (3.1) BS01 rna ? GO:0002181 ... P0C018 32518240
    20 6wnt:p (3.1) BS01 rna ? GO:0000027 ... P0A7K6 32518240
    21 6wnt:q (3.1) BS01 rna ? GO:0000027 ... P0A7L3 32518240
    22 6wnt:r (3.1) BS01 rna ? GO:0002181 ... P0AG48 32518240
    23 6wnt:s (3.1) BS01 rna ? GO:0002181 ... P61175 32518240
    24 6wnt:t (3.1) BS01 rna ? GO:0000027 ... P0ADZ0 32518240
    25 6wnt:u (3.1) BS01 rna ? GO:0000027 ... P60624 32518240
    26 6wnt:v (3.1) BS01 rna ? GO:0000027 ... P68919 32518240
    27 6wnt:w (3.1) BS01 rna ? GO:0003735 ... P0A7L8 32518240
    28 6wnt:x (3.1) BS01 rna ? GO:0000027 ... P0A7M2 32518240
    29 6wnt:y (3.1) BS01 rna ? GO:0000027 ... P0A7M6 32518240
    30 6wnt:z (3.1) BS01 rna ? GO:0000027 ... P0AG51 32518240
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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