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BioLiP
Download all results in tab-seperated text for 123 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6wkv:0 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    2 6wkv:0 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    3 6wkv:1 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    4 6wkv:1 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    5 6wkv:2 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    6 6wkv:2 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    7 6wkv:3 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    8 6wkv:3 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    9 6wkv:3 (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    10 6wkv:4 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    11 6wkv:4 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    12 6wkv:5 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    13 6wkv:5 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    14 6wkv:6 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    15 6wkv:6 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    16 6wkv:7 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    17 6wkv:7 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    18 6wkv:8 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    19 6wkv:8 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    20 6wkv:9 (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    21 6wkv:9 (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    22 6wkv:A (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    23 6wkv:B (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    24 6wkv:B (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    25 6wkv:C (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    26 6wkv:C (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    27 6wkv:D (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    28 6wkv:D (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    29 6wkv:E (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    30 6wkv:E (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    31 6wkv:F (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    32 6wkv:F (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    33 6wkv:G (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    34 6wkv:G (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    35 6wkv:H (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    36 6wkv:H (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    37 6wkv:I (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    38 6wkv:I (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    39 6wkv:J (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    40 6wkv:J (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    41 6wkv:K (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    42 6wkv:K (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    43 6wkv:L (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    44 6wkv:L (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    45 6wkv:M (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    46 6wkv:M (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    47 6wkv:N (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    48 6wkv:N (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    49 6wkv:O (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    50 6wkv:O (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    51 6wkv:P (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    52 6wkv:P (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    53 6wkv:Q (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    54 6wkv:Q (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    55 6wkv:R (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    56 6wkv:R (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    57 6wkv:S (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    58 6wkv:S (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    59 6wkv:T (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    60 6wkv:T (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    61 6wkv:U (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    62 6wkv:U (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    63 6wkv:V (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    64 6wkv:V (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    65 6wkv:W (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    66 6wkv:W (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    67 6wkv:W (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    68 6wkv:X (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    69 6wkv:X (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    70 6wkv:Y (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    71 6wkv:Y (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    72 6wkv:Z (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    73 6wkv:Z (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    74 6wkv:a (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    75 6wkv:a (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    76 6wkv:b (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    77 6wkv:b (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    78 6wkv:c (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    79 6wkv:c (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    80 6wkv:d (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    81 6wkv:d (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    82 6wkv:e (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    83 6wkv:e (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    84 6wkv:f (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    85 6wkv:f (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    86 6wkv:g (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    87 6wkv:g (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    88 6wkv:h (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    89 6wkv:h (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    90 6wkv:h (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    91 6wkv:i (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    92 6wkv:i (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    93 6wkv:j (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    94 6wkv:j (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    95 6wkv:k (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    96 6wkv:k (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    97 6wkv:l (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    98 6wkv:l (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    99 6wkv:m (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    100 6wkv:m (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    101 6wkv:n (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    102 6wkv:n (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    103 6wkv:o (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    104 6wkv:o (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    105 6wkv:p (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    106 6wkv:p (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    107 6wkv:p (2.99) BS03 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    108 6wkv:q (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    109 6wkv:q (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    110 6wkv:r (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    111 6wkv:r (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    112 6wkv:s (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    113 6wkv:s (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    114 6wkv:t (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    115 6wkv:t (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    116 6wkv:u (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    117 6wkv:u (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    118 6wkv:v (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    119 6wkv:v (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    120 6wkv:w (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    121 6wkv:w (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    122 6wkv:x (2.99) BS01 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A
    123 6wkv:x (2.99) BS02 FMN 3.4.-.- GO:0006508 ... Q9WZP2 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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