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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5v8k:A (2.2) BS01 peptide ? GO:0009579 ... Q1MX24 28751471
    2 5v8k:A (2.2) BS02 GB0 ? GO:0009579 ... Q1MX24 28751471
    3 5v8k:A (2.2) BS03 GBF ? GO:0009579 ... Q1MX24 28751471
    4 5v8k:A (2.2) BS04 AOH ? GO:0009579 ... Q1MX24 28751471
    5 5v8k:A (2.2) BS05 GBF ? GO:0009579 ... Q1MX24 28751471
    6 5v8k:A (2.2) BS06 GB0 ? GO:0009579 ... Q1MX24 28751471
    7 5v8k:A (2.2) BS07 GBF ? GO:0009579 ... Q1MX24 28751471
    8 5v8k:A (2.2) BS08 GBF ? GO:0009579 ... Q1MX24 28751471
    9 5v8k:A (2.2) BS09 GBF ? GO:0009579 ... Q1MX24 28751471
    10 5v8k:A (2.2) BS10 GBF ? GO:0009579 ... Q1MX24 28751471
    11 5v8k:A (2.2) BS11 GBF ? GO:0009579 ... Q1MX24 28751471
    12 5v8k:A (2.2) BS12 GBF ? GO:0009579 ... Q1MX24 28751471
    13 5v8k:A (2.2) BS13 GBF ? GO:0009579 ... Q1MX24 28751471
    14 5v8k:A (2.2) BS14 GBF ? GO:0009579 ... Q1MX24 28751471
    15 5v8k:A (2.2) BS15 GBF ? GO:0009579 ... Q1MX24 28751471
    16 5v8k:A (2.2) BS16 GBF ? GO:0009579 ... Q1MX24 28751471
    17 5v8k:A (2.2) BS17 GBF ? GO:0009579 ... Q1MX24 28751471
    18 5v8k:A (2.2) BS18 GBF ? GO:0009579 ... Q1MX24 28751471
    19 5v8k:A (2.2) BS19 GBF ? GO:0009579 ... Q1MX24 28751471
    20 5v8k:A (2.2) BS20 GBF ? GO:0009579 ... Q1MX24 28751471
    21 5v8k:A (2.2) BS21 GBF ? GO:0009579 ... Q1MX24 28751471
    22 5v8k:A (2.2) BS22 GBF ? GO:0009579 ... Q1MX24 28751471
    23 5v8k:A (2.2) BS23 GBF ? GO:0009579 ... Q1MX24 28751471
    24 5v8k:A (2.2) BS24 GBF ? GO:0009579 ... Q1MX24 28751471
    25 5v8k:A (2.2) BS25 GBF ? GO:0009579 ... Q1MX24 28751471
    26 5v8k:A (2.2) BS26 GBF ? GO:0009579 ... Q1MX24 28751471
    27 5v8k:A (2.2) BS27 GBF ? GO:0009579 ... Q1MX24 28751471
    28 5v8k:A (2.2) BS28 GBF ? GO:0009579 ... Q1MX24 28751471
    29 5v8k:A (2.2) BS29 GBF ? GO:0009579 ... Q1MX24 28751471
    30 5v8k:A (2.2) BS30 SF4 ? GO:0009579 ... Q1MX24 28751471
    31 5v8k:A (2.2) BS31 CA ? GO:0009579 ... Q1MX24 28751471
    32 5v8k:A (2.2) BS32 CA ? GO:0009579 ... Q1MX24 28751471
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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